Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

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Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:107507573-109338517

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193 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stmm1 7 100505707 to 107683208 7177501 QTL skin tumor modifier of MSM 1
Syt9 7 107370728 to 107548656 177928 + protein coding gene synaptotagmin IX
D7Mit324 7 107509644 to 107509736 92 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 324
A930026C06Rik 7 107517531 to 107519548 2017 unclassified gene RIKEN cDNA A930026C06 gene
Tssr68416 7 107567424 to 107567440 16 + TSS region transcription start site region 68416
Tssr68417 7 107567445 to 107567461 16 + TSS region transcription start site region 68417
Olfml1 7 107567446 to 107591094 23648 + protein coding gene olfactomedin-like 1
Tssr68418 7 107567647 to 107567708 61 + TSS region transcription start site region 68418
Tssr68419 7 107567718 to 107567746 28 + TSS region transcription start site region 68419
Gm44773 7 107592950 to 107593506 556 + lincRNA gene predicted gene 44773
Tssr68420 7 107594105 to 107594130 25 + TSS region transcription start site region 68420
Cpgi19549 7 107594608 to 107595669 1061 CpG island CpG island 19549
Tssr68421 7 107595032 to 107595060 28 + TSS region transcription start site region 68421
Tssr68422 7 107595068 to 107595085 17 + TSS region transcription start site region 68422
Tssr68423 7 107595184 to 107595233 49 + TSS region transcription start site region 68423
Ppfibp2 7 107595207 to 107748583 153376 + protein coding gene PTPRF interacting protein, binding protein 2 (liprin beta 2)
Tssr68424 7 107595239 to 107595263 24 + TSS region transcription start site region 68424
Tssr68425 7 107604027 to 107604039 12 + TSS region transcription start site region 68425
Gm44772 7 107623971 to 107625161 1190 + unclassified gene predicted gene 44772
5330417H12Rik 7 107623971 to 107625161 1190 - unclassified gene RIKEN cDNA 5330417H12 gene
Tssr68426 7 107639112 to 107639129 17 + TSS region transcription start site region 68426
Tssr68427 7 107639156 to 107639191 35 + TSS region transcription start site region 68427
Tssr68428 7 107653055 to 107653072 17 + TSS region transcription start site region 68428
D7Mit129 7 107661088 to 107661193 105 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 129
Tssr68429 7 107661893 to 107661901 8 + TSS region transcription start site region 68429
Tssr68430 7 107664678 to 107664693 15 + TSS region transcription start site region 68430
Tssr68431 7 107664767 to 107664781 14 + TSS region transcription start site region 68431
Tssr68432 7 107664784 to 107664794 10 + TSS region transcription start site region 68432
Tssr68433 7 107664909 to 107664927 18 + TSS region transcription start site region 68433
Tssr68434 7 107664932 to 107664992 60 + TSS region transcription start site region 68434
Tssr68435 7 107665001 to 107665015 14 + TSS region transcription start site region 68435
Tssr2361 7 107665364 to 107665381 17 + TSS region transcription start site region 2361
Tssr68436 7 107665585 to 107665606 21 + TSS region transcription start site region 68436
Tssr68437 7 107665680 to 107665720 40 + TSS region transcription start site region 68437
Tssr68438 7 107665819 to 107665870 51 + TSS region transcription start site region 68438
Tssr68439 7 107666186 to 107666204 18 + TSS region transcription start site region 68439
Tssr68440 7 107670345 to 107670351 6 + TSS region transcription start site region 68440
Tssr68441 7 107681679 to 107681691 12 + TSS region transcription start site region 68441
D7Mit124 7 107683097 to 107683208 111 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 124
Tssr68442 7 107684993 to 107684998 5 + TSS region transcription start site region 68442
Tssr68443 7 107685482 to 107685548 66 + TSS region transcription start site region 68443
Tssr68444 7 107685562 to 107685575 13 + TSS region transcription start site region 68444
Tssr68445 7 107691840 to 107691859 19 + TSS region transcription start site region 68445
Tssr68446 7 107693136 to 107693149 13 + TSS region transcription start site region 68446
Tssr68447 7 107693156 to 107693167 11 + TSS region transcription start site region 68447
Tssr68448 7 107693218 to 107693244 26 + TSS region transcription start site region 68448
Tssr68449 7 107693268 to 107693278 10 + TSS region transcription start site region 68449
Tssr68450 7 107693284 to 107693291 7 + TSS region transcription start site region 68450
Tssr68451 7 107693881 to 107693893 12 + TSS region transcription start site region 68451
Tssr68452 7 107708978 to 107708986 8 + TSS region transcription start site region 68452
4933409K08Rik 7 107719730 to 107724402 4672 unclassified gene RIKEN cDNA 4933409K08 gene
Tssr68453 7 107722909 to 107722928 19 + TSS region transcription start site region 68453
Cyb5r2 7 107748455 to 107758032 9577 - protein coding gene cytochrome b5 reductase 2
Cpgi19550 7 107757775 to 107758120 345 CpG island CpG island 19550
Tssr74162 7 107757897 to 107757935 38 - TSS region transcription start site region 74162
Tssr74163 7 107757993 to 107758010 17 - TSS region transcription start site region 74163
Gm45040 7 107780914 to 107786446 5532 + antisense lncRNA gene predicted gene 45040
Ovch2 7 107781544 to 107801179 19635 - protein coding gene ovochymase 2
Tssr2362 7 107801185 to 107801194 9 - TSS region transcription start site region 2362
Tssr74164 7 107801214 to 107801238 24 - TSS region transcription start site region 74164
Tssr74165 7 107801247 to 107801261 14 - TSS region transcription start site region 74165
Olfr467 7 107814586 to 107815506 920 + protein coding gene olfactory receptor 467
Olfr468-ps1 7 107816529 to 107817056 527 + pseudogene olfactory receptor 468, pseudogene 1
Olfr469 7 107822523 to 107823467 944 - protein coding gene olfactory receptor 469
Gm5002 7 107840511 to 107840733 222 - pseudogene predicted gene 5002
Olfr470 7 107844787 to 107845731 944 - protein coding gene olfactory receptor 470
Olfr471 7 107861064 to 107861999 935 - protein coding gene olfactory receptor 471
Tssr68454 7 107862960 to 107862967 7 + TSS region transcription start site region 68454
Gm10156 7 107863039 to 107863500 461 + pseudogene predicted gene 10156
Olfr472 7 107902719 to 107903651 932 + protein coding gene olfactory receptor 472
D7Mit235 7 107928405 to 107928553 148 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 235
Olfr473 7 107933522 to 107934454 932 + protein coding gene olfactory receptor 473
Gm9449 7 107951346 to 107952356 1010 - pseudogene predicted gene 9449
Tssr74166 7 107952688 to 107952705 17 - TSS region transcription start site region 74166
Olfr474 7 107954643 to 107955575 932 + protein coding gene olfactory receptor 474
Olfr476 7 107967399 to 107968331 932 + protein coding gene olfactory receptor 476
Olfr477 7 107990367 to 107991299 932 + protein coding gene olfactory receptor 477
Gm6702 7 108019016 to 108019486 470 + pseudogene predicted gene 6702
Olfr478 7 108031301 to 108033961 2660 - protein coding gene olfactory receptor 478
Olfr479 7 108054424 to 108056061 1637 + protein coding gene olfactory receptor 479
Olfr480 7 108065768 to 108066796 1028 - protein coding gene olfactory receptor 480
Olfr481 7 108080796 to 108081734 938 + protein coding gene olfactory receptor 481
Gm45375 7 108081864 to 108082143 279 + pseudogene predicted gene 45375
Gm4199 7 108093206 to 108094573 1367 - pseudogene predicted gene 4199
Gm44870 7 108094129 to 108094485 356 - pseudogene predicted gene 44870
Olfr482 7 108094597 to 108095568 971 - protein coding gene olfactory receptor 482
Olfr483 7 108103311 to 108104258 947 + protein coding gene olfactory receptor 483
D7Mit94 7 108116425 to 108116574 149 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 94
Gm25424 7 108120470 to 108120527 57 - snRNA gene predicted gene, 25424
Olfr484 7 108124296 to 108125261 965 - protein coding gene olfactory receptor 484
Olfr485 7 108158918 to 108159871 953 - protein coding gene olfactory receptor 485
Olfr486 7 108171798 to 108172742 944 - protein coding gene olfactory receptor 486
Gm39066 7 108184604 to 108185725 1121 + lncRNA gene predicted gene, 39066
Gm18944 7 108203145 to 108203787 642 + pseudogene predicted gene, 18944
Olfr487 7 108211583 to 108212527 944 - protein coding gene olfactory receptor 487
Olfr488 7 108255192 to 108256136 944 - protein coding gene olfactory receptor 488
Gm6007 7 108269533 to 108270353 820 + pseudogene predicted gene 6007
Olfr489-ps1 7 108276748 to 108277712 964 + pseudogene olfactory receptor 489, pseudogene 1
Olfr490 7 108286180 to 108287124 944 - protein coding gene olfactory receptor 490
Gm44594 7 108307894 to 108308300 406 - pseudogene predicted gene 44594
Olfr491 7 108316896 to 108317828 932 + protein coding gene olfactory receptor 491
Olfr492 7 108322730 to 108323674 944 - protein coding gene olfactory receptor 492
Olfr493 7 108346035 to 108346979 944 - protein coding gene olfactory receptor 493
Olfr494 7 108367492 to 108368436 944 + protein coding gene olfactory receptor 494
D7Mit327 7 108385090 to 108385208 118 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 327
Gm45392 7 108387636 to 108387849 213 - pseudogene predicted gene 45392
Olfr495 7 108395122 to 108396114 992 + protein coding gene olfactory receptor 495
Olfr496-ps1 7 108417104 to 108418018 914 + pseudogene olfactory receptor 496, pseudogene 1
Olfr497 7 108422573 to 108423517 944 + protein coding gene olfactory receptor 497
Gm44611 7 108458981 to 108459335 354 - pseudogene predicted gene 44611
Olfr498 7 108465326 to 108466318 992 + protein coding gene olfactory receptor 498
Olfr499-ps1 7 108475756 to 108477407 1651 - pseudogene olfactory receptor 499, pseudogene 1
Olfr500-ps1 7 108485908 to 108486840 932 + pseudogene olfactory receptor 500, pseudogene 1
Olfr501-ps1 7 108508058 to 108509000 942 + polymorphic pseudogene olfactory receptor 501, pseudogene 1
Olfr502 7 108523004 to 108523948 944 - protein coding gene olfactory receptor 502
Gm5053 7 108527727 to 108529070 1343 - pseudogene predicted gene 5053
Olfr503 7 108544527 to 108545498 971 + protein coding gene olfactory receptor 503
Olfr504 7 108564837 to 108565793 956 - protein coding gene olfactory receptor 504
Gm18410 7 108566250 to 108566826 576 - pseudogene predicted gene, 18410
Gm44865 7 108566845 to 108567375 530 + pseudogene predicted gene 44865
Olfr505-ps1 7 108574524 to 108575385 861 + pseudogene olfactory receptor 505, pseudogene 1
Gm19127 7 108579038 to 108581482 2444 - pseudogene predicted gene, 19127
Olfr506 7 108612309 to 108613253 944 + protein coding gene olfactory receptor 506
Olfr507 7 108621814 to 108622764 950 + protein coding gene olfactory receptor 507
Olfr508 7 108629994 to 108630926 932 + protein coding gene olfactory receptor 508
Olfr509 7 108645609 to 108646574 965 - protein coding gene olfactory receptor 509
Olfr510 7 108666424 to 108668362 1938 + protein coding gene olfactory receptor 510
Olfr511-ps1 7 108696201 to 108696417 216 + pseudogene olfactory receptor 511, pseudogene 1
Olfr512 7 108713355 to 108714335 980 + protein coding gene olfactory receptor 512
Olfr513 7 108754858 to 108755787 929 + protein coding gene olfactory receptor 513
Gm45232 7 108795003 to 108795164 161 + pseudogene predicted gene 45232
Tssr68455 7 108804485 to 108804489 4 + TSS region transcription start site region 68455
Olfr514 7 108825065 to 108825997 932 - protein coding gene olfactory receptor 514
Olfr515-ps1 7 108843304 to 108843492 188 - pseudogene olfactory receptor 515, pseudogene 1
Olfr516 7 108845064 to 108846008 944 - protein coding gene olfactory receptor 516
Gm17992 7 108865424 to 108866495 1071 + pseudogene predicted gene, 17992
Olfr517 7 108868208 to 108869152 944 - protein coding gene olfactory receptor 517
Olfr518 7 108880603 to 108881604 1001 - protein coding gene olfactory receptor 518
D7Mit17 7 108883789 to 108883949 160 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 17
Nba3 7 108883789 to 108883949 160 QTL New Zealand Black autoimmunity 3
Skull10 7 108883789 to 108883949 160 QTL skull morphology 10
Lskcn2 7 108883789 to 119094307 10210518 QTL LSK cell number 2
Olfr519 7 108893461 to 108894405 944 - protein coding gene olfactory receptor 519
Nlrp10 7 108921853 to 108930158 8305 - protein coding gene NLR family, pyrin domain containing 10
Tssr74167 7 108924391 to 108924395 4 - TSS region transcription start site region 74167
Tssr74168 7 108930151 to 108930164 13 - TSS region transcription start site region 74168
Tssr74169 7 108930168 to 108930183 15 - TSS region transcription start site region 74169
D7Mit127 7 108932735 to 108932934 199 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 127
Cpgi19551 7 108934266 to 108934909 643 CpG island CpG island 19551
Tssr68456 7 108934405 to 108934430 25 + TSS region transcription start site region 68456
Eif3f 7 108934415 to 108941942 7527 + protein coding gene eukaryotic translation initiation factor 3, subunit F
Tssr68457 7 108934517 to 108934528 11 + TSS region transcription start site region 68457
Tssr68458 7 108938036 to 108938063 27 + TSS region transcription start site region 68458
Tssr68459 7 108938067 to 108938091 24 + TSS region transcription start site region 68459
Tssr68460 7 108938469 to 108938488 19 + TSS region transcription start site region 68460
Cpgi19552 7 108950177 to 108951474 1297 CpG island CpG island 19552
Tssr68461 7 108950472 to 108950485 13 + TSS region transcription start site region 68461
Tssr68462 7 108950628 to 108950679 51 + TSS region transcription start site region 68462
BC049265 7 108950656 to 108961534 10878 unclassified gene cDNA sequence BC049265
Tssr68463 7 108950697 to 108950703 6 + TSS region transcription start site region 68463
Gm26599 7 108950754 to 108961535 10781 - lincRNA gene predicted gene, 26599
Gm39067 7 108954159 to 108955256 1097 - lncRNA gene predicted gene, 39067
Gm32309 7 108969683 to 108992084 22401 - lncRNA gene predicted gene, 32309
Cpgi19553 7 109010463 to 109011592 1129 CpG island CpG island 19553
Tssr2363 7 109010827 to 109010835 8 + TSS region transcription start site region 2363
Tssr68464 7 109010842 to 109010845 3 + TSS region transcription start site region 68464
Tssr68465 7 109010850 to 109010930 80 + TSS region transcription start site region 68465
Tub 7 109010880 to 109034459 23579 + protein coding gene tubby bipartite transcription factor
Ric3 7 109034312 to 109083331 49019 - protein coding gene RIC3 acetylcholine receptor chaperone
Gm25450 7 109076136 to 109076242 106 - snRNA gene predicted gene, 25450
D7Mill3 7 109076458 to 109076585 127 DNA segment DNA segment, Chr 7, Millennium Pharmaceuticals Inc 3
Cpgi19554 7 109082946 to 109083580 634 CpG island CpG island 19554
Tssr74170 7 109083284 to 109083337 53 - TSS region transcription start site region 74170
D7Mit219 7 109096065 to 109096188 123 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 219
Lmo1 7 109138572 to 109175207 36635 - protein coding gene LIM domain only 1
Gm44781 7 109142887 to 109146604 3717 + antisense lncRNA gene predicted gene 44781
D7Mill4 7 109165463 to 109165710 247 DNA segment DNA segment, Chr 7, Millennium Pharmaceuticals Inc 4
Cpgi19555 7 109169254 to 109170224 970 CpG island CpG island 19555
Tssr74171 7 109170044 to 109170064 20 - TSS region transcription start site region 74171
Tssr74172 7 109170529 to 109170557 28 - TSS region transcription start site region 74172
Cpgi19556 7 109174430 to 109175972 1542 CpG island CpG island 19556
Tssr74173 7 109175115 to 109175126 11 - TSS region transcription start site region 74173
Tssr74174 7 109175130 to 109175171 41 - TSS region transcription start site region 74174
Tssr74175 7 109175313 to 109175356 43 - TSS region transcription start site region 74175
Tssr74176 7 109175358 to 109175369 11 - TSS region transcription start site region 74176
D7Mit325 7 109200103 to 109200202 99 DNA segment DNA Segment, Chr 7, Massachusetts Institute of Technology 325
Gm45024 7 109208301 to 109224200 15899 - lincRNA gene predicted gene 45024
D7Mit280 7 109230147 to 109230254 107 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 280
Cpgi19557 7 109241343 to 109241552 209 CpG island CpG island 19557
Gm32563 7 109252932 to 109256986 4054 + lncRNA gene predicted gene, 32563
Stk33 7 109279223 to 109439081 159858 - protein coding gene serine/threonine kinase 33
D7Mill5 7 109284527 to 109284719 192 DNA segment DNA segment, Chr 7, Millennium Pharmaceuticals Inc 5
D7Mill6 7 109289616 to 109289776 160 DNA segment DNA segment, Chr 7, Millennium Pharmaceuticals Inc 6