Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:105397200-105567216

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fam160a2 7 105371211 to 105400054 28843 - protein coding gene family with sequence similarity 160, member A2
Cpgi19532 7 105399405 to 105400741 1336 CpG island CpG island 19532
Tssr74035 7 105399965 to 105399982 17 - TSS region transcription start site region 74035
Tssr74036 7 105399991 to 105400023 32 - TSS region transcription start site region 74036
Gm45885 7 105400314 to 105401892 1578 + bidirectional promoter lncRNA gene predicted gene 45885
Cnga4 7 105404568 to 105408742 4174 + protein coding gene cyclic nucleotide gated channel alpha 4
Cpgi19533 7 105405521 to 105406005 484 CpG island CpG island 19533
Gm4972 7 105412720 to 105413973 1253 - pseudogene predicted gene 4972
Cpgi19534 7 105425401 to 105426246 845 CpG island CpG island 19534
Cckbr 7 105425559 to 105436339 10780 + protein coding gene cholecystokinin B receptor
Tssr68376 7 105425934 to 105426002 68 + TSS region transcription start site region 68376
Cpgi19535 7 105433644 to 105434219 575 CpG island CpG island 19535
Cpgi19536 7 105434518 to 105435443 925 CpG island CpG island 19536
Cavin3 7 105480616 to 105482197 1581 - protein coding gene caveolae associated 3
Tssr68377 7 105480953 to 105480999 46 + TSS region transcription start site region 68377
Cpgi19537 7 105481529 to 105482382 853 CpG island CpG island 19537
Tssr74037 7 105481853 to 105481904 51 - TSS region transcription start site region 74037
Tssr74038 7 105481925 to 105481940 15 - TSS region transcription start site region 74038
Gm45667 7 105481927 to 105483242 1315 + unclassified gene predicted gene 45667
Tssr74039 7 105481953 to 105481964 11 - TSS region transcription start site region 74039
Tssr74040 7 105482200 to 105482216 16 - TSS region transcription start site region 74040
Gm36847 7 105482644 to 105522672 40028 + lncRNA gene predicted gene, 36847
Gm39063 7 105544901 to 105554275 9374 - lncRNA gene predicted gene, 39063
Cpgi19538 7 105554086 to 105554478 392 CpG island CpG island 19538
Smpd1 7 105554360 to 105558389 4029 + protein coding gene sphingomyelin phosphodiesterase 1, acid lysosomal
Tssr68378 7 105554378 to 105554487 109 + TSS region transcription start site region 68378
Tssr68379 7 105554499 to 105554514 15 + TSS region transcription start site region 68379
Apbb1 7 105558483 to 105581653 23170 - protein coding gene amyloid beta (A4) precursor protein-binding, family B, member 1
Tssr74041 7 105565475 to 105565489 14 - TSS region transcription start site region 74041
Tssr74042 7 105565500 to 105565523 23 - TSS region transcription start site region 74042
Tssr74043 7 105565571 to 105565589 18 - TSS region transcription start site region 74043