Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:101960576-102540595

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169 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Numa1 7 101934111 to 102014964 80853 + protein coding gene nuclear mitotic apparatus protein 1
Tssr68287 7 101969636 to 101969674 38 + TSS region transcription start site region 68287
Cpgi19515 7 101969691 to 101970609 918 CpG island CpG island 19515
Tssr68288 7 101969796 to 101969840 44 + TSS region transcription start site region 68288
Tssr68289 7 101970132 to 101970185 53 + TSS region transcription start site region 68289
Tssr68290 7 101970191 to 101970206 15 + TSS region transcription start site region 68290
Tssr68291 7 101970211 to 101970223 12 + TSS region transcription start site region 68291
Tssr68292 7 101970642 to 101970689 47 + TSS region transcription start site region 68292
Tssr68293 7 101970690 to 101970730 40 + TSS region transcription start site region 68293
Tssr68294 7 101976873 to 101976880 7 + TSS region transcription start site region 68294
C030040A22Rik 7 101979660 to 101982290 2630 unclassified gene RIKEN cDNA C030040A22 gene
Gm45313 7 101980083 to 101980260 177 - pseudogene predicted gene 45313
Gm39061 7 101988668 to 101990948 2280 - lncRNA gene predicted gene, 39061
Tssr68295 7 101993261 to 101993276 15 + TSS region transcription start site region 68295
Cpgi19516 7 102001091 to 102001294 203 CpG island CpG island 19516
Tssr73892 7 102007756 to 102007760 4 - TSS region transcription start site region 73892
Il18bp 7 102015077 to 102018155 3078 - protein coding gene interleukin 18 binding protein
Tssr73893 7 102015683 to 102015698 15 - TSS region transcription start site region 73893
Tssr73894 7 102015808 to 102015833 25 - TSS region transcription start site region 73894
Tssr73895 7 102016122 to 102016144 22 - TSS region transcription start site region 73895
Tssr73896 7 102016145 to 102016157 12 - TSS region transcription start site region 73896
Tssr2353 7 102017388 to 102017398 10 + TSS region transcription start site region 2353
Tssr73897 7 102017630 to 102017650 20 - TSS region transcription start site region 73897
Tssr73898 7 102017653 to 102017671 18 - TSS region transcription start site region 73898
Tssr73899 7 102018139 to 102018206 67 - TSS region transcription start site region 73899
Tssr73900 7 102018222 to 102018239 17 - TSS region transcription start site region 73900
Rnf121 7 102019137 to 102065469 46332 - protein coding gene ring finger protein 121
Tssr68296 7 102019152 to 102019153 1 + TSS region transcription start site region 68296
Tssr73901 7 102019491 to 102019516 25 - TSS region transcription start site region 73901
Tssr73902 7 102019525 to 102019540 15 - TSS region transcription start site region 73902
Tssr73903 7 102019551 to 102019558 7 - TSS region transcription start site region 73903
Tssr68297 7 102041283 to 102041289 6 + TSS region transcription start site region 68297
Tssr73904 7 102062482 to 102062492 10 - TSS region transcription start site region 73904
Cpgi19517 7 102065057 to 102065734 677 CpG island CpG island 19517
Tssr73905 7 102065126 to 102065159 33 - TSS region transcription start site region 73905
Tssr68298 7 102065485 to 102065527 42 + TSS region transcription start site region 68298
Xndc1 7 102065511 to 102083765 18254 + protein coding gene Xrcc1 N-terminal domain containing 1
Xntrpc 7 102065713 to 102096864 31151 + protein coding gene Xndc1-transient receptor potential cation channel, subfamily C, member 2 readthrough
Tssr68299 7 102065738 to 102065771 33 + TSS region transcription start site region 68299
Tssr73906 7 102072409 to 102072417 8 - TSS region transcription start site region 73906
Tssr73907 7 102072419 to 102072428 9 - TSS region transcription start site region 73907
Tssr68300 7 102072521 to 102072535 14 + TSS region transcription start site region 68300
Trpc2 7 102083116 to 102096396 13280 + protein coding gene transient receptor potential cation channel, subfamily C, member 2
Cpgi19518 7 102084181 to 102084551 370 CpG island CpG island 19518
Art5 7 102096879 to 102100307 3428 - protein coding gene ADP-ribosyltransferase 5
Tssr73908 7 102099895 to 102099906 11 - TSS region transcription start site region 73908
Tssr73909 7 102099932 to 102099943 11 - TSS region transcription start site region 73909
Tssr73910 7 102100202 to 102100219 17 - TSS region transcription start site region 73910
Tssr73911 7 102100227 to 102100258 31 - TSS region transcription start site region 73911
Art1 7 102101706 to 102111758 10052 + protein coding gene ADP-ribosyltransferase 1
Tssr68301 7 102101736 to 102101752 16 + TSS region transcription start site region 68301
Cpgi19519 7 102106741 to 102107257 516 CpG island CpG island 19519
Tssr68302 7 102107044 to 102107073 29 + TSS region transcription start site region 68302
Tssr68303 7 102107146 to 102107149 3 + TSS region transcription start site region 68303
Chrna10 7 102111266 to 102116828 5562 - protein coding gene cholinergic receptor, nicotinic, alpha polypeptide 10
Cpgi19520 7 102113031 to 102113744 713 CpG island CpG island 19520
Gm39062 7 102113387 to 102122062 8675 + lncRNA gene predicted gene, 39062
Tssr73912 7 102116705 to 102116719 14 - TSS region transcription start site region 73912
Tssr73913 7 102116721 to 102116733 12 - TSS region transcription start site region 73913
Tssr73914 7 102116743 to 102116755 12 - TSS region transcription start site region 73914
Tssr73915 7 102116763 to 102116774 11 - TSS region transcription start site region 73915
Nup98 7 102119398 to 102210176 90778 - protein coding gene nucleoporin 98
Tssr73916 7 102120180 to 102120185 5 - TSS region transcription start site region 73916
Tssr73917 7 102120303 to 102120323 20 - TSS region transcription start site region 73917
Tssr73918 7 102151415 to 102151421 6 - TSS region transcription start site region 73918
Tssr73919 7 102163727 to 102163749 22 - TSS region transcription start site region 73919
Tssr73920 7 102209160 to 102209164 4 - TSS region transcription start site region 73920
Cpgi19521 7 102209611 to 102210756 1145 CpG island CpG island 19521
Tssr73921 7 102209826 to 102209910 84 - TSS region transcription start site region 73921
Tssr73922 7 102210074 to 102210094 20 - TSS region transcription start site region 73922
Tssr73923 7 102210120 to 102210157 37 - TSS region transcription start site region 73923
Tssr68304 7 102210168 to 102210177 9 + TSS region transcription start site region 68304
Tssr73924 7 102210172 to 102210183 11 - TSS region transcription start site region 73924
Pgap2 7 102210213 to 102238564 28351 + protein coding gene post-GPI attachment to proteins 2
Tssr73925 7 102210270 to 102210277 7 - TSS region transcription start site region 73925
Tssr73926 7 102210382 to 102210408 26 - TSS region transcription start site region 73926
Tssr73927 7 102210409 to 102210435 26 - TSS region transcription start site region 73927
Tssr68305 7 102210428 to 102210445 17 + TSS region transcription start site region 68305
Tssr68306 7 102210499 to 102210553 54 + TSS region transcription start site region 68306
Tssr68307 7 102210592 to 102210620 28 + TSS region transcription start site region 68307
Tssr68308 7 102222411 to 102222439 28 + TSS region transcription start site region 68308
Cpgi19522 7 102222979 to 102223357 378 CpG island CpG island 19522
Tssr68309 7 102223021 to 102223076 55 + TSS region transcription start site region 68309
Tssr68310 7 102223522 to 102223530 8 + TSS region transcription start site region 68310
Tssr68311 7 102225812 to 102225823 11 + TSS region transcription start site region 68311
Tssr68312 7 102229969 to 102230023 54 + TSS region transcription start site region 68312
Tssr68313 7 102230026 to 102230046 20 + TSS region transcription start site region 68313
Tssr68314 7 102230129 to 102230145 16 + TSS region transcription start site region 68314
Tssr68315 7 102230151 to 102230167 16 + TSS region transcription start site region 68315
Tssr68316 7 102230821 to 102230824 3 + TSS region transcription start site region 68316
Tssr68317 7 102230825 to 102230835 10 + TSS region transcription start site region 68317
Tssr68318 7 102231025 to 102231069 44 + TSS region transcription start site region 68318
Tssr68319 7 102231577 to 102231613 36 + TSS region transcription start site region 68319
Tssr68320 7 102233074 to 102233085 11 + TSS region transcription start site region 68320
Tssr68321 7 102233088 to 102233108 20 + TSS region transcription start site region 68321
Tssr68322 7 102233114 to 102233124 10 + TSS region transcription start site region 68322
Cpgi19523 7 102236045 to 102236520 475 CpG island CpG island 19523
Tssr68323 7 102238090 to 102238115 25 + TSS region transcription start site region 68323
Rhog 7 102239123 to 102250118 10995 - protein coding gene ras homolog family member G
Tssr68324 7 102239431 to 102239463 32 + TSS region transcription start site region 68324
Tssr73928 7 102239492 to 102239512 20 - TSS region transcription start site region 73928
Tssr73929 7 102239573 to 102239587 14 - TSS region transcription start site region 73929
Tssr73930 7 102239600 to 102239616 16 - TSS region transcription start site region 73930
Tssr73931 7 102239625 to 102239653 28 - TSS region transcription start site region 73931
Tssr73932 7 102239716 to 102239725 9 - TSS region transcription start site region 73932
Tssr73933 7 102239834 to 102239867 33 - TSS region transcription start site region 73933
Tssr73934 7 102239929 to 102239993 64 - TSS region transcription start site region 73934
Tssr73935 7 102240059 to 102240148 89 - TSS region transcription start site region 73935
Tssr73936 7 102240191 to 102240211 20 - TSS region transcription start site region 73936
Tssr68325 7 102240204 to 102240222 18 + TSS region transcription start site region 68325
Tssr68326 7 102242609 to 102242624 15 + TSS region transcription start site region 68326
Tssr73937 7 102245422 to 102245427 5 - TSS region transcription start site region 73937
Tssr73938 7 102247081 to 102247087 6 - TSS region transcription start site region 73938
Tssr68327 7 102247743 to 102247758 15 + TSS region transcription start site region 68327
Tssr73939 7 102249362 to 102249374 12 - TSS region transcription start site region 73939
Tssr73940 7 102249412 to 102249421 9 - TSS region transcription start site region 73940
Tssr73941 7 102249454 to 102249474 20 - TSS region transcription start site region 73941
Tssr73942 7 102249542 to 102249559 17 - TSS region transcription start site region 73942
Tssr68328 7 102249620 to 102249693 73 + TSS region transcription start site region 68328
Cpgi19524 7 102249642 to 102250984 1342 CpG island CpG island 19524
Tssr68329 7 102249702 to 102249714 12 + TSS region transcription start site region 68329
Tssr73943 7 102250075 to 102250086 11 - TSS region transcription start site region 73943
Tssr73944 7 102250086 to 102250123 37 - TSS region transcription start site region 73944
Tssr73945 7 102250127 to 102250138 11 - TSS region transcription start site region 73945
Tssr68330 7 102250220 to 102250255 35 + TSS region transcription start site region 68330
Tssr2354 7 102250259 to 102250276 17 + TSS region transcription start site region 2354
Tssr73946 7 102250323 to 102250334 11 - TSS region transcription start site region 73946
Tssr73947 7 102250466 to 102250479 13 - TSS region transcription start site region 73947
Tssr73948 7 102250491 to 102250515 24 - TSS region transcription start site region 73948
Tssr73949 7 102250527 to 102250548 21 - TSS region transcription start site region 73949
Tssr73950 7 102250576 to 102250595 19 - TSS region transcription start site region 73950
Tssr68331 7 102266791 to 102266844 53 + TSS region transcription start site region 68331
Cpgi19525 7 102266970 to 102268442 1472 CpG island CpG island 19525
Tssr68332 7 102267294 to 102267349 55 + TSS region transcription start site region 68332
Tssr68333 7 102267795 to 102267854 59 + TSS region transcription start site region 68333
Stim1 7 102267806 to 102437319 169513 + protein coding gene stromal interaction molecule 1
Tssr68334 7 102268124 to 102268189 65 + TSS region transcription start site region 68334
Tssr68335 7 102299546 to 102299550 4 + TSS region transcription start site region 68335
Tssr68336 7 102310504 to 102310508 4 + TSS region transcription start site region 68336
Tssr68337 7 102317448 to 102317451 3 + TSS region transcription start site region 68337
Tssr68338 7 102335769 to 102335772 3 + TSS region transcription start site region 68338
Tssr68339 7 102340704 to 102340718 14 + TSS region transcription start site region 68339
A630057J21Rik 7 102360972 to 102363484 2512 unclassified non-coding RNA gene RIKEN cDNA A630057J21 gene
Gm18255 7 102377573 to 102378337 764 - pseudogene predicted gene, 18255
Tssr68340 7 102426574 to 102426582 8 + TSS region transcription start site region 68340
Tssr68341 7 102433535 to 102433539 4 + TSS region transcription start site region 68341
Cpgi19526 7 102441538 to 102442345 807 CpG island CpG island 19526
Tssr68342 7 102441685 to 102441698 13 + TSS region transcription start site region 68342
Rrm1 7 102441695 to 102469771 28076 + protein coding gene ribonucleotide reductase M1
Tssr68343 7 102441745 to 102441756 11 + TSS region transcription start site region 68343
Tssr68344 7 102441776 to 102441825 49 + TSS region transcription start site region 68344
Tssr68345 7 102441831 to 102441888 57 + TSS region transcription start site region 68345
Tssr68346 7 102441911 to 102441963 52 + TSS region transcription start site region 68346
Tssr68347 7 102442683 to 102442693 10 + TSS region transcription start site region 68347
Tssr68348 7 102442732 to 102442752 20 + TSS region transcription start site region 68348
Gm45399 7 102458245 to 102459260 1015 + unclassified gene predicted gene 45399
Gm45996 7 102470456 to 102476684 6228 + lncRNA gene predicted gene, 45996
Olfr543 7 102476773 to 102477902 1129 - protein coding gene olfactory receptor 543
Tssr73951 7 102481689 to 102481696 7 - TSS region transcription start site region 73951
Tssr68349 7 102483113 to 102483115 2 + TSS region transcription start site region 68349
Olfr544 7 102484114 to 102488307 4193 - protein coding gene olfactory receptor 544
BC049285 7 102492271 to 102493723 1452 unclassified gene cDNA sequence BC049285
Olfr545 7 102493823 to 102494773 950 - protein coding gene olfactory receptor 545
Gm38627 7 102505481 to 102506425 944 + lncRNA gene predicted gene, 38627
Cpgi19527 7 102512792 to 102513464 672 CpG island CpG island 19527
Gm8556 7 102520346 to 102521009 663 - pseudogene predicted gene 8556
Olfr546-ps1 7 102521331 to 102521656 325 + pseudogene olfactory receptor 546, pseudogene 1
D7Mit218 7 102534180 to 102534323 143 DNA segment DNA segment, Chr 7, Massachusetts Institute of Technology 218
Olfr547 7 102534749 to 102535684 935 + protein coding gene olfactory receptor 547