Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 7:101385376-101678330

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42 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arap1 7 101348067 to 101412586 64519 + protein coding gene ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1
Tssr68244 7 101385523 to 101385552 29 + TSS region transcription start site region 68244
Tssr68245 7 101386785 to 101386800 15 + TSS region transcription start site region 68245
Tssr68246 7 101394361 to 101394436 75 + TSS region transcription start site region 68246
Tssr68247 7 101406593 to 101406618 25 + TSS region transcription start site region 68247
Gm45837 7 101410886 to 101512819 101933 + protein coding gene predicted gene 45837
Tssr68248 7 101421691 to 101421726 35 + TSS region transcription start site region 68248
Pde2a 7 101421691 to 101512827 91136 + protein coding gene phosphodiesterase 2A, cGMP-stimulated
Cpgi19504 7 101450464 to 101451662 1198 CpG island CpG island 19504
Tssr68249 7 101451247 to 101451321 74 + TSS region transcription start site region 68249
Tssr68250 7 101451376 to 101451390 14 + TSS region transcription start site region 68250
Tssr68251 7 101451407 to 101451429 22 + TSS region transcription start site region 68251
Tssr68252 7 101460924 to 101460947 23 + TSS region transcription start site region 68252
Mir139 7 101475376 to 101475443 67 + miRNA gene microRNA 139
Tssr2351 7 101500642 to 101500649 7 + TSS region transcription start site region 2351
Cpgi19505 7 101504327 to 101504811 484 CpG island CpG island 19505
Cpgi19506 7 101515943 to 101516121 178 CpG island CpG island 19506
Tssr73840 7 101521449 to 101521452 3 - TSS region transcription start site region 73840
Gm35363 7 101525376 to 101538330 12954 - lincRNA gene predicted gene, 35363
Tssr68253 7 101537792 to 101537803 11 + TSS region transcription start site region 68253
Tssr73841 7 101538181 to 101538197 16 - TSS region transcription start site region 73841
Tssr73842 7 101538255 to 101538260 5 - TSS region transcription start site region 73842
Tssr73843 7 101538324 to 101538370 46 - TSS region transcription start site region 73843
Tssr68254 7 101547865 to 101547872 7 + TSS region transcription start site region 68254
Gm19765 7 101547872 to 101557457 9585 + lncRNA gene predicted gene, 19765
Tssr68255 7 101548079 to 101548087 8 + TSS region transcription start site region 68255
Tssr73844 7 101550775 to 101550807 32 - TSS region transcription start site region 73844
Art2a 7 101552453 to 101560865 8412 - polymorphic pseudogene ADP-ribosyltransferase 2a
Tssr73845 7 101560863 to 101560866 3 - TSS region transcription start site region 73845
Gm7027 7 101573460 to 101574321 861 - pseudogene predicted gene 7027
Art2b 7 101576970 to 101585600 8630 - protein coding gene ADP-ribosyltransferase 2b
Tssr68256 7 101581218 to 101581231 13 + TSS region transcription start site region 68256
Gm45995 7 101581595 to 101582829 1234 + lncRNA gene predicted gene, 45995
Tssr73846 7 101585593 to 101585607 14 - TSS region transcription start site region 73846
Tssr73847 7 101620644 to 101620648 4 - TSS region transcription start site region 73847
Cpgi19507 7 101663560 to 101664258 698 CpG island CpG island 19507
Clpb 7 101663593 to 101790721 127128 + protein coding gene ClpB caseinolytic peptidase B
Tssr68257 7 101663603 to 101663613 10 + TSS region transcription start site region 68257
Tssr68258 7 101663614 to 101663617 3 + TSS region transcription start site region 68258
Tssr68259 7 101663635 to 101663679 44 + TSS region transcription start site region 68259
Tssr68260 7 101663727 to 101663734 7 + TSS region transcription start site region 68260
Tssr68261 7 101663741 to 101663790 49 + TSS region transcription start site region 68261