Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:86398804-86488817

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35 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi17663 6 86403874 to 86404817 943 CpG island CpG island 17663
n-TGccc4 6 86403893 to 86403963 70 + tRNA gene nuclear encoded tRNA glycine 4 (anticodon CCC)
Tssr57463 6 86404191 to 86404198 7 + TSS region transcription start site region 57463
Tia1 6 86404219 to 86433405 29186 + protein coding gene cytotoxic granule-associated RNA binding protein 1
Tssr57464 6 86404220 to 86404240 20 + TSS region transcription start site region 57464
Tssr57465 6 86404257 to 86404319 62 + TSS region transcription start site region 57465
Tssr57466 6 86404341 to 86404380 39 + TSS region transcription start site region 57466
Tssr57467 6 86405877 to 86405882 5 + TSS region transcription start site region 57467
Gm44790 6 86426658 to 86445630 18972 + protein coding gene predicted gene 44790
C87436 6 86437328 to 86470388 33060 + protein coding gene expressed sequence C87436
Cpgi17664 6 86438090 to 86439163 1073 CpG island CpG island 17664
Tssr57468 6 86438360 to 86438405 45 + TSS region transcription start site region 57468
Tssr57469 6 86438415 to 86438431 16 + TSS region transcription start site region 57469
Tssr61792 6 86438618 to 86438636 18 - TSS region transcription start site region 61792
Tssr57470 6 86438666 to 86438713 47 + TSS region transcription start site region 57470
Tssr57471 6 86438714 to 86438727 13 + TSS region transcription start site region 57471
Tssr57472 6 86438748 to 86438758 10 + TSS region transcription start site region 57472
Tssr57473 6 86443804 to 86443817 13 + TSS region transcription start site region 57473
Tssr57474 6 86443819 to 86443863 44 + TSS region transcription start site region 57474
A430078I02Rik 6 86470277 to 86480830 10553 - antisense lncRNA gene RIKEN cDNA A430078I02 gene
Cpgi17665 6 86471827 to 86472838 1011 CpG island CpG island 17665
Tssr61793 6 86472164 to 86472175 11 - TSS region transcription start site region 61793
Tssr61794 6 86472182 to 86472228 46 - TSS region transcription start site region 61794
Tssr57475 6 86472766 to 86472809 43 + TSS region transcription start site region 57475
Tssr57476 6 86472817 to 86472831 14 + TSS region transcription start site region 57476
Gm38849 6 86472901 to 86473503 602 + lncRNA gene predicted gene, 38849
2310040G24Rik 6 86483376 to 86488227 4851 - lincRNA gene RIKEN cDNA 2310040G24 gene
Tssr61795 6 86484883 to 86484888 5 - TSS region transcription start site region 61795
Tssr57477 6 86487442 to 86487493 51 + TSS region transcription start site region 57477
Tssr57478 6 86487503 to 86487516 13 + TSS region transcription start site region 57478
Tssr61796 6 86487936 to 86487948 12 - TSS region transcription start site region 61796
Tssr61797 6 86488014 to 86488085 71 - TSS region transcription start site region 61797
Tssr61798 6 86488087 to 86488098 11 - TSS region transcription start site region 61798
Tssr61799 6 86488185 to 86488214 29 - TSS region transcription start site region 61799
Tssr61800 6 86488303 to 86488324 21 - TSS region transcription start site region 61800