Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:6855971-7139661

44 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Dlx6os1	6	6820546 to 6869533	48987	-	antisense lncRNA gene	distal-less homeobox 6, opposite strand 1
Gm44094	6	6854222 to 6856251	2029	-	unclassified gene	predicted gene, 44094
Cpgi17138	6	6859809 to 6861111	1302		CpG island	CpG island 17138
Cpgi17139	6	6861405 to 6861567	162		CpG island	CpG island 17139
Tssr59773	6	6861642 to 6861655	13	-	TSS region	transcription start site region 59773
Tssr59774	6	6861678 to 6861685	7	-	TSS region	transcription start site region 59774
Tssr59775	6	6861737 to 6861740	3	-	TSS region	transcription start site region 59775
Cpgi17140	6	6862670 to 6863020	350		CpG island	CpG island 17140
Tssr59776	6	6862828 to 6862838	10	-	TSS region	transcription start site region 59776
Tssr59777	6	6862839 to 6862856	17	-	TSS region	transcription start site region 59777
Tssr54876	6	6862962 to 6862979	17	+	TSS region	transcription start site region 54876
Tssr54877	6	6862988 to 6863002	14	+	TSS region	transcription start site region 54877
Tssr54878	6	6863269 to 6863272	3	+	TSS region	transcription start site region 54878
Cpgi17141	6	6863275 to 6864962	1687		CpG island	CpG island 17141
Dlx6	6	6863334 to 6867970	4636	+	protein coding gene	distal-less homeobox 6
Tssr54879	6	6863551 to 6863570	19	+	TSS region	transcription start site region 54879
Tssr54880	6	6863769 to 6863781	12	+	TSS region	transcription start site region 54880
Dlx6os2	6	6863797 to 6865150	1353	-	antisense lncRNA gene	distal-less homeobox 6, opposite strand 2
Tssr54881	6	6867869 to 6867879	10	+	TSS region	transcription start site region 54881
Tssr59778	6	6869365 to 6869368	3	-	TSS region	transcription start site region 59778
Tssr59779	6	6869489 to 6869503	14	-	TSS region	transcription start site region 59779
Tssr59780	6	6869517 to 6869539	22	-	TSS region	transcription start site region 59780
Tssr59781	6	6871533 to 6871538	5	-	TSS region	transcription start site region 59781
Tssr59782	6	6871562 to 6871573	11	-	TSS region	transcription start site region 59782
Tssr59783	6	6871588 to 6871589	1	-	TSS region	transcription start site region 59783
Tssr59784	6	6871621 to 6871635	14	-	TSS region	transcription start site region 59784
Cpgi17142	6	6874446 to 6874805	359		CpG island	CpG island 17142
Dlx5	6	6877801 to 6882068	4267	-	protein coding gene	distal-less homeobox 5
Tssr59785	6	6877952 to 6877955	3	-	TSS region	transcription start site region 59785
Cpgi17143	6	6878145 to 6879644	1499		CpG island	CpG island 17143
Cpgi17144	6	6879971 to 6880268	297		CpG island	CpG island 17144
Cpgi17145	6	6881079 to 6882200	1121		CpG island	CpG island 17145
Tssr59786	6	6881117 to 6881132	15	-	TSS region	transcription start site region 59786
Tssr59787	6	6881928 to 6881949	21	-	TSS region	transcription start site region 59787
Tssr59788	6	6881950 to 6881985	35	-	TSS region	transcription start site region 59788
Tssr59789	6	6881986 to 6882007	21	-	TSS region	transcription start site region 59789
Tssr59790	6	6882076 to 6882092	16	-	TSS region	transcription start site region 59790
Gm22155	6	6924118 to 6924279	161	-	snRNA gene	predicted gene, 22155
D6Mit139	6	6931487 to 6931600	113		DNA segment	DNA segment, Chr 6, Massachusetts Institute of Technology 139
Gm26774	6	6952170 to 6955900	3730	-	lincRNA gene	predicted gene, 26774
Cpgi17146	6	6955816 to 6956477	661		CpG island	CpG island 17146
Tssr54882	6	6955993 to 6956049	56	+	TSS region	transcription start site region 54882
Sdhaf3	6	6956018 to 7039220	83202	+	protein coding gene	succinate dehydrogenase complex assembly factor 3
Tssr54883	6	7036909 to 7036913	4	+	TSS region	transcription start site region 54883