Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:125121909-125154753

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Chd4	6	125095986 to 125130591	34605	+	protein coding gene	chromodomain helicase DNA binding protein 4
Tssr58917	6	125122470 to 125122504	34	+	TSS region	transcription start site region 58917
Tssr58918	6	125129863 to 125129872	9	+	TSS region	transcription start site region 58918
Tssr58919	6	125130470 to 125130473	3	+	TSS region	transcription start site region 58919
Cpgi17994	6	125131301 to 125132618	1317		CpG island	CpG island 17994
Tssr63243	6	125131757 to 125131770	13	-	TSS region	transcription start site region 63243
Tssr63244	6	125131786 to 125131819	33	-	TSS region	transcription start site region 63244
Tssr58920	6	125131869 to 125131953	84	+	TSS region	transcription start site region 58920
Nop2	6	125131909 to 125144753	12844	+	protein coding gene	NOP2 nucleolar protein
Tssr58921	6	125136677 to 125136681	4	+	TSS region	transcription start site region 58921
Cpgi17995	6	125145165 to 125146102	937		CpG island	CpG island 17995
Tssr58922	6	125145210 to 125145234	24	+	TSS region	transcription start site region 58922
Tssr58923	6	125145235 to 125145250	15	+	TSS region	transcription start site region 58923
Iffo1	6	125145241 to 125161782	16541	+	protein coding gene	intermediate filament family orphan 1
Tssr58924	6	125145259 to 125145278	19	+	TSS region	transcription start site region 58924
Tssr58925	6	125145295 to 125145298	3	+	TSS region	transcription start site region 58925
Tssr58926	6	125145400 to 125145413	13	+	TSS region	transcription start site region 58926
Cpgi17996	6	125148794 to 125148976	182		CpG island	CpG island 17996