Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:124779547-124883701

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83 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Lrrc23 6 124769863 to 124779727 9864 - protein coding gene leucine rich repeat containing 23
Tssr63162 6 124779637 to 124779648 11 - TSS region transcription start site region 63162
Tssr2010 6 124779666 to 124779680 14 - TSS region transcription start site region 2010
Tssr63163 6 124779686 to 124779742 56 - TSS region transcription start site region 63163
Tssr63164 6 124779746 to 124779763 17 - TSS region transcription start site region 63164
Tssr63165 6 124780442 to 124780474 32 - TSS region transcription start site region 63165
Gm38895 6 124789334 to 124790310 976 + lncRNA gene predicted gene, 38895
Gm38894 6 124789734 to 124797093 7359 - lncRNA gene predicted gene, 38894
Cpgi17970 6 124805521 to 124805879 358 CpG island CpG island 17970
Tssr63166 6 124805717 to 124805745 28 - TSS region transcription start site region 63166
Tssr58845 6 124805816 to 124805854 38 + TSS region transcription start site region 58845
Tssr58846 6 124808658 to 124808704 46 + TSS region transcription start site region 58846
Spsb2 6 124808661 to 124810619 1958 + protein coding gene splA/ryanodine receptor domain and SOCS box containing 2
Cpgi17971 6 124808675 to 124809874 1199 CpG island CpG island 17971
Tssr58847 6 124808898 to 124808933 35 + TSS region transcription start site region 58847
Tssr58848 6 124808936 to 124808956 20 + TSS region transcription start site region 58848
Tssr58849 6 124809724 to 124809760 36 + TSS region transcription start site region 58849
Tpi1 6 124810592 to 124814296 3704 - protein coding gene triosephosphate isomerase 1
Tssr63167 6 124812482 to 124812503 21 - TSS region transcription start site region 63167
Tssr63168 6 124812890 to 124812916 26 - TSS region transcription start site region 63168
Tssr63169 6 124812963 to 124813033 70 - TSS region transcription start site region 63169
Tssr63170 6 124813045 to 124813057 12 - TSS region transcription start site region 63170
Tssr63171 6 124813065 to 124813092 27 - TSS region transcription start site region 63171
Tssr63172 6 124813095 to 124813111 16 - TSS region transcription start site region 63172
Cpgi17972 6 124813467 to 124813780 313 CpG island CpG island 17972
Tssr63173 6 124814151 to 124814168 17 - TSS region transcription start site region 63173
Tssr63174 6 124814269 to 124814278 9 - TSS region transcription start site region 63174
Tssr63175 6 124814288 to 124814296 8 - TSS region transcription start site region 63175
Tssr63176 6 124814297 to 124814310 13 - TSS region transcription start site region 63176
Usp5 6 124815019 to 124829484 14465 - protein coding gene ubiquitin specific peptidase 5 (isopeptidase T)
Tssr2011 6 124817997 to 124818007 10 - TSS region transcription start site region 2011
Tssr63177 6 124818011 to 124818021 10 - TSS region transcription start site region 63177
Tssr63178 6 124818039 to 124818054 15 - TSS region transcription start site region 63178
Tssr63179 6 124819436 to 124819453 17 - TSS region transcription start site region 63179
Tssr63180 6 124828313 to 124828343 30 - TSS region transcription start site region 63180
Cpgi17973 6 124828924 to 124829654 730 CpG island CpG island 17973
Tssr63181 6 124829398 to 124829452 54 - TSS region transcription start site region 63181
Tssr63182 6 124829467 to 124829478 11 - TSS region transcription start site region 63182
Tssr58850 6 124829494 to 124829513 19 + TSS region transcription start site region 58850
Tssr58851 6 124829516 to 124829539 23 + TSS region transcription start site region 58851
Tssr58852 6 124829540 to 124829577 37 + TSS region transcription start site region 58852
Cdca3 6 124829547 to 124833701 4154 + protein coding gene cell division cycle associated 3
Tssr58853 6 124829582 to 124829587 5 + TSS region transcription start site region 58853
Tssr58854 6 124830193 to 124830209 16 + TSS region transcription start site region 58854
Tssr58855 6 124830218 to 124830251 33 + TSS region transcription start site region 58855
Cpgi17974 6 124830261 to 124830627 366 CpG island CpG island 17974
Gnb3 6 124834240 to 124840275 6035 - protein coding gene guanine nucleotide binding protein (G protein), beta 3
Tssr63183 6 124839967 to 124840016 49 - TSS region transcription start site region 63183
Tssr63184 6 124840041 to 124840052 11 - TSS region transcription start site region 63184
Tssr63185 6 124840058 to 124840069 11 - TSS region transcription start site region 63185
Tssr63186 6 124840183 to 124840186 3 - TSS region transcription start site region 63186
Tssr63187 6 124840192 to 124840205 13 - TSS region transcription start site region 63187
P3h3 6 124841095 to 124857687 16592 - protein coding gene prolyl 3-hydroxylase 3
Cpgi17975 6 124856942 to 124858288 1346 CpG island CpG island 17975
Tssr58856 6 124857140 to 124857165 25 + TSS region transcription start site region 58856
Tssr63188 6 124857687 to 124857705 18 - TSS region transcription start site region 63188
Tssr63189 6 124857707 to 124857755 48 - TSS region transcription start site region 63189
Gm32404 6 124857807 to 124858428 621 + lncRNA gene predicted gene, 32404
Gpr162 6 124858444 to 124863983 5539 - protein coding gene G protein-coupled receptor 162
Gm46975 6 124859144 to 124859997 853 + lncRNA gene predicted gene, 46975
Cpgi17976 6 124859879 to 124860170 291 CpG island CpG island 17976
Cpgi17977 6 124861109 to 124861436 327 CpG island CpG island 17977
Tssr63190 6 124863050 to 124863061 11 - TSS region transcription start site region 63190
Cpgi17978 6 124863451 to 124864168 717 CpG island CpG island 17978
Tssr63191 6 124863698 to 124863724 26 - TSS region transcription start site region 63191
Tssr63192 6 124863725 to 124863771 46 - TSS region transcription start site region 63192
Tssr63193 6 124863877 to 124863996 119 - TSS region transcription start site region 63193
Tssr63194 6 124864082 to 124864093 11 - TSS region transcription start site region 63194
Tssr63195 6 124864123 to 124864149 26 - TSS region transcription start site region 63195
Tssr63196 6 124864151 to 124864165 14 - TSS region transcription start site region 63196
Cd4 6 124864692 to 124888221 23529 - protein coding gene CD4 antigen
Tssr63197 6 124864919 to 124864934 15 - TSS region transcription start site region 63197
D6Mit24 6 124865122 to 124865236 114 DNA segment DNA segment, Chr 6, Massachusetts Institute of Technology 24
Tssr63198 6 124865248 to 124865256 8 - TSS region transcription start site region 63198
Tssr63199 6 124865299 to 124865308 9 - TSS region transcription start site region 63199
Tssr63200 6 124865542 to 124865551 9 - TSS region transcription start site region 63200
Tssr63201 6 124865613 to 124865622 9 - TSS region transcription start site region 63201
Tssr2012 6 124865696 to 124865701 5 - TSS region transcription start site region 2012
Tssr63202 6 124865717 to 124865726 9 - TSS region transcription start site region 63202
Tssr63203 6 124865765 to 124865781 16 - TSS region transcription start site region 63203
Tssr63204 6 124865793 to 124865804 11 - TSS region transcription start site region 63204
Tssr63205 6 124865828 to 124865837 9 - TSS region transcription start site region 63205
Tssr63206 6 124870521 to 124870529 8 - TSS region transcription start site region 63206