Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:121398541-122329057

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82 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Iqsec3 6 121372933 to 121473678 100745 - protein coding gene IQ motif and Sec7 domain 3
Cpgi17939 6 121412368 to 121413754 1386 CpG island CpG island 17939
Cpgi17940 6 121428326 to 121428540 214 CpG island CpG island 17940
Cpgi17941 6 121462843 to 121463249 406 CpG island CpG island 17941
Cpgi17942 6 121472856 to 121473908 1052 CpG island CpG island 17942
Tssr62813 6 121473588 to 121473628 40 - TSS region transcription start site region 62813
Tssr62814 6 121473630 to 121473680 50 - TSS region transcription start site region 62814
Gm43922 6 121538196 to 121538523 327 + pseudogene predicted gene, 43922
Gm43933 6 121547594 to 121547860 266 - pseudogene predicted gene, 43933
Gm43934 6 121560201 to 121560588 387 + pseudogene predicted gene, 43934
Gm43945 6 121625712 to 121626465 753 + pseudogene predicted gene, 43945
Tssr1993 6 121630434 to 121630437 3 + TSS region transcription start site region 1993
A2m 6 121636166 to 121679238 43072 + protein coding gene alpha-2-macroglobulin
Tssr58629 6 121636218 to 121636237 19 + TSS region transcription start site region 58629
Tssr58630 6 121636258 to 121636265 7 + TSS region transcription start site region 58630
Cpgi17943 6 121636262 to 121636419 157 CpG island CpG island 17943
Tssr58631 6 121636268 to 121636279 11 + TSS region transcription start site region 58631
Tssr58632 6 121638288 to 121638299 11 + TSS region transcription start site region 58632
Tssr58633 6 121641334 to 121641352 18 + TSS region transcription start site region 58633
Tssr58634 6 121644896 to 121644927 31 + TSS region transcription start site region 58634
Gm44018 6 121708643 to 121709049 406 - pseudogene predicted gene, 44018
Tssr58635 6 121732971 to 121732972 1 + TSS region transcription start site region 58635
Gm7298 6 121734495 to 121784639 50144 + protein coding gene predicted gene 7298
Gm46973 6 121759018 to 121759151 133 - pseudogene predicted gene, 46973
Tssr58636 6 121838450 to 121838470 20 + TSS region transcription start site region 58636
Tssr58637 6 121838489 to 121838510 21 + TSS region transcription start site region 58637
Tssr58638 6 121838514 to 121838528 14 + TSS region transcription start site region 58638
Mug1 6 121838541 to 121889057 50516 + protein coding gene murinoglobulin 1
Tssr58639 6 121838625 to 121838639 14 + TSS region transcription start site region 58639
Tssr58640 6 121838672 to 121838681 9 + TSS region transcription start site region 58640
Tssr58641 6 121846717 to 121846742 25 + TSS region transcription start site region 58641
Tssr58642 6 121846815 to 121846846 31 + TSS region transcription start site region 58642
Tssr58643 6 121847818 to 121847822 4 + TSS region transcription start site region 58643
Tssr58644 6 121847963 to 121847978 15 + TSS region transcription start site region 58644
Tssr58645 6 121861119 to 121861137 18 + TSS region transcription start site region 58645
Tssr58646 6 121865726 to 121865745 19 + TSS region transcription start site region 58646
Tssr58647 6 121865819 to 121865848 29 + TSS region transcription start site region 58647
Tssr58648 6 121870580 to 121870595 15 + TSS region transcription start site region 58648
Tssr58649 6 121871310 to 121871321 11 + TSS region transcription start site region 58649
Gm44173 6 121914990 to 121915100 110 - pseudogene predicted gene, 44173
Mug4-ps 6 121916430 to 121956147 39717 + pseudogene murinoglobulin 4, pseudogene
Mug2 6 122006761 to 122085965 79204 + protein coding gene murinoglobulin 2
Gm44184 6 122034504 to 122034635 131 - pseudogene predicted gene, 44184
Tssr58650 6 122078704 to 122078707 3 + TSS region transcription start site region 58650
Tssr58651 6 122136628 to 122136638 10 + TSS region transcription start site region 58651
Gm10319 6 122136628 to 122150958 14330 + pseudogene predicted pseudogene 10319
Mug-ps1 6 122176053 to 122248566 72513 + pseudogene murinoglobulin, pseudogene 1
Gm27703 6 122200137 to 122200246 109 + miRNA gene predicted gene, 27703
Gm46974 6 122206326 to 122206643 317 - pseudogene predicted gene, 46974
Klrg1 6 122270596 to 122282833 12237 - protein coding gene killer cell lectin-like receptor subfamily G, member 1
Tssr62815 6 122279820 to 122279843 23 - TSS region transcription start site region 62815
Tssr62816 6 122279931 to 122279956 25 - TSS region transcription start site region 62816
Tssr62817 6 122282588 to 122282628 40 - TSS region transcription start site region 62817
Tssr62818 6 122282787 to 122282798 11 - TSS region transcription start site region 62818
Tssr62819 6 122282810 to 122282821 11 - TSS region transcription start site region 62819
Tssr62820 6 122282890 to 122282908 18 - TSS region transcription start site region 62820
Tssr62821 6 122282910 to 122282921 11 - TSS region transcription start site region 62821
Tssr62822 6 122282946 to 122282955 9 - TSS region transcription start site region 62822
Tssr58652 6 122283003 to 122283025 22 + TSS region transcription start site region 58652
Tssr62823 6 122283229 to 122283242 13 - TSS region transcription start site region 62823
Tssr58653 6 122294094 to 122294111 17 + TSS region transcription start site region 58653
Tssr58654 6 122294147 to 122294163 16 + TSS region transcription start site region 58654
Tssr58655 6 122294174 to 122294185 11 + TSS region transcription start site region 58655
Tssr62824 6 122294474 to 122294488 14 - TSS region transcription start site region 62824
Gm6637 6 122295664 to 122296045 381 + pseudogene predicted gene 6637
Gm27826 6 122305544 to 122305798 254 - unclassified non-coding RNA gene predicted gene, 27826
Gm44227 6 122305948 to 122306188 240 + pseudogene predicted gene, 44227
Cpgi17944 6 122308569 to 122309336 767 CpG island CpG island 17944
Tssr58656 6 122308656 to 122308683 27 + TSS region transcription start site region 58656
Tssr58657 6 122308684 to 122308711 27 + TSS region transcription start site region 58657
Tssr58658 6 122308814 to 122308839 25 + TSS region transcription start site region 58658
Tssr58659 6 122308923 to 122308934 11 + TSS region transcription start site region 58659
Tssr58660 6 122308953 to 122308966 13 + TSS region transcription start site region 58660
Tssr58661 6 122308969 to 122309018 49 + TSS region transcription start site region 58661
M6pr 6 122309010 to 122317677 8667 + protein coding gene mannose-6-phosphate receptor, cation dependent
Tssr1994 6 122309043 to 122309045 2 + TSS region transcription start site region 1994
Tssr1995 6 122309057 to 122309071 14 + TSS region transcription start site region 1995
Tssr58662 6 122316082 to 122316092 10 + TSS region transcription start site region 58662
Phc1 6 122317731 to 122340227 22496 - protein coding gene polyhomeotic 1
Tssr62825 6 122323556 to 122323585 29 - TSS region transcription start site region 62825
Tssr62826 6 122325490 to 122325519 29 - TSS region transcription start site region 62826
Tssr62827 6 122325687 to 122325700 13 - TSS region transcription start site region 62827