Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:120843119-120967062

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Ibdq2	6	106005405 to 120917141	14911736		QTL	inflammatory bowel disease QTL 2
Bcl2l13	6	120836217 to 120892842	56625	+	protein coding gene	BCL2-like 13 (apoptosis facilitator)
Tssr58557	6	120870037 to 120870041	4	+	TSS region	transcription start site region 58557
Bid	6	120893119 to 120917141	24022	-	protein coding gene	BH3 interacting domain death agonist
Gm17812	6	120908673 to 120908990	317	+	pseudogene	predicted gene, 17812
Gm44260	6	120912900 to 120914993	2093	-	unclassified gene	predicted gene, 44260
Cpgi17929	6	120915911 to 120916974	1063		CpG island	CpG island 17929
Tssr62785	6	120916764 to 120916780	16	-	TSS region	transcription start site region 62785
Tssr62786	6	120916782 to 120916807	25	-	TSS region	transcription start site region 62786
Tssr62787	6	120916813 to 120916867	54	-	TSS region	transcription start site region 62787
Tssr58558	6	120927165 to 120927183	18	+	TSS region	transcription start site region 58558
Mical3	6	120931707 to 121130999	199292	-	protein coding gene	microtubule associated monooxygenase, calponin and LIM domain containing 3
Tssr58559	6	120932854 to 120932865	11	+	TSS region	transcription start site region 58559
Tssr58560	6	120932873 to 120932890	17	+	TSS region	transcription start site region 58560
Tssr62788	6	120933805 to 120933809	4	-	TSS region	transcription start site region 62788
Gm43916	6	120951901 to 120952867	966	+	antisense lncRNA gene	predicted gene, 43916
Cpgi17930	6	120958295 to 120959045	750		CpG island	CpG island 17930
Gm43915	6	120958844 to 120997498	38654	+	antisense lncRNA gene	predicted gene, 43915