Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:119382531-119594347

40 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Adipor2	6	119353150 to 119417483	64333	-	protein coding gene	adiponectin receptor 2
Tssr58499	6	119386655 to 119386681	26	+	TSS region	transcription start site region 58499
Cpgi17909	6	119387934 to 119389145	1211		CpG island	CpG island 17909
Tssr62710	6	119388671 to 119388739	68	-	TSS region	transcription start site region 62710
Tssr62711	6	119388752 to 119388772	20	-	TSS region	transcription start site region 62711
Tssr58500	6	119388872 to 119388888	16	+	TSS region	transcription start site region 58500
Tssr58501	6	119388890 to 119388920	30	+	TSS region	transcription start site region 58501
Tssr62712	6	119388964 to 119388968	4	-	TSS region	transcription start site region 62712
Tssr62713	6	119389022 to 119389031	9	-	TSS region	transcription start site region 62713
Tssr62714	6	119399119 to 119399121	2	-	TSS region	transcription start site region 62714
Tssr62715	6	119401982 to 119401998	16	-	TSS region	transcription start site region 62715
Tssr62716	6	119417479 to 119417530	51	-	TSS region	transcription start site region 62716
Tssr62717	6	119417547 to 119417558	11	-	TSS region	transcription start site region 62717
Tssr62718	6	119417599 to 119417623	24	-	TSS region	transcription start site region 62718
Tssr62719	6	119417678 to 119417707	29	-	TSS region	transcription start site region 62719
Wnt5b	6	119432531 to 119544347	111816	-	protein coding gene	wingless-type MMTV integration site family, member 5B
Cpgi17910	6	119448869 to 119449277	408		CpG island	CpG island 17910
Tssr62720	6	119467191 to 119467202	11	-	TSS region	transcription start site region 62720
Tssr62721	6	119467210 to 119467223	13	-	TSS region	transcription start site region 62721
Gm40397	6	119467362 to 119476311	8949	+	lncRNA gene	predicted gene, 40397
Cpgi17911	6	119478868 to 119481299	2431		CpG island	CpG island 17911
Tssr58502	6	119479480 to 119479502	22	+	TSS region	transcription start site region 58502
Tssr58503	6	119479504 to 119479530	26	+	TSS region	transcription start site region 58503
Tssr58504	6	119479531 to 119479547	16	+	TSS region	transcription start site region 58504
Fbxl14	6	119479668 to 119482630	2962	+	protein coding gene	F-box and leucine-rich repeat protein 14
Tssr58505	6	119479745 to 119479795	50	+	TSS region	transcription start site region 58505
Tssr62722	6	119480459 to 119480494	35	-	TSS region	transcription start site region 62722
Tssr58506	6	119481382 to 119481394	12	+	TSS region	transcription start site region 58506
Tssr58507	6	119481460 to 119481488	28	+	TSS region	transcription start site region 58507
Tssr58508	6	119481520 to 119481541	21	+	TSS region	transcription start site region 58508
Tssr58509	6	119481545 to 119481563	18	+	TSS region	transcription start site region 58509
Tssr62723	6	119481557 to 119481580	23	-	TSS region	transcription start site region 62723
Tssr58510	6	119481938 to 119481951	13	+	TSS region	transcription start site region 58510
Tssr58511	6	119515697 to 119515700	3	+	TSS region	transcription start site region 58511
Tssr62724	6	119517954 to 119517959	5	-	TSS region	transcription start site region 62724
Gm30690	6	119518005 to 119531087	13082	+	lncRNA gene	predicted gene, 30690
Cpgi17912	6	119543188 to 119544842	1654		CpG island	CpG island 17912
Tssr62725	6	119544282 to 119544304	22	-	TSS region	transcription start site region 62725
Erc1	6	119570796 to 119848167	277371	-	protein coding gene	ELKS/RAB6-interacting/CAST family member 1
Gm44317	6	119570941 to 119578057	7116	+	antisense lncRNA gene	predicted gene, 44317