Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 6:113738831-114047613

28 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Sec13	6	113728052 to 113740681	12629	-	protein coding gene	SEC13 homolog, nuclear pore and COPII coat complex component
Cpgi17854	6	113740263 to 113740903	640		CpG island	CpG island 17854
Tssr62472	6	113740675 to 113740708	33	-	TSS region	transcription start site region 62472
Tssr1963	6	113740728 to 113740734	6	-	TSS region	transcription start site region 1963
Atp2b2	6	113743842 to 114042613	298771	-	protein coding gene	ATPase, Ca++ transporting, plasma membrane 2
Tssr62473	6	113747121 to 113747125	4	-	TSS region	transcription start site region 62473
Cpgi17855	6	113748349 to 113748941	592		CpG island	CpG island 17855
Gm44167	6	113797807 to 113799684	1877	-	sense intronic lncRNA gene	predicted gene, 44167
Tssr62474	6	113843481 to 113843493	12	-	TSS region	transcription start site region 62474
Cpgi17856	6	113856995 to 113857158	163		CpG island	CpG island 17856
Cpgi17857	6	113890657 to 113892188	1531		CpG island	CpG island 17857
Tssr62475	6	113891294 to 113891375	81	-	TSS region	transcription start site region 62475
D6Oda37	6	113896888 to 113897047	159		DNA segment	DNA segment, Chr 6, Sen-ichi Oda 37
Tssr62476	6	113910446 to 113910451	5	-	TSS region	transcription start site region 62476
Tssr62477	6	113910471 to 113910484	13	-	TSS region	transcription start site region 62477
Tssr62478	6	113910485 to 113910497	12	-	TSS region	transcription start site region 62478
Tssr62479	6	113910543 to 113910552	9	-	TSS region	transcription start site region 62479
Tssr62480	6	113910578 to 113910585	7	-	TSS region	transcription start site region 62480
D6Oda33	6	113920848 to 113920993	145		DNA segment	DNA segment, Chr 6, Sen-ichi Oda 33
Tssr62481	6	113934679 to 113934695	16	-	TSS region	transcription start site region 62481
Gm15082	6	113937739 to 113940206	2467	+	antisense lncRNA gene	predicted gene 15082
Tssr62482	6	113980005 to 113980006	1	-	TSS region	transcription start site region 62482
Tssr1964	6	114004754 to 114004766	12	+	TSS region	transcription start site region 1964
Gm15083	6	114004789 to 114052265	47476	+	antisense lncRNA gene	predicted gene 15083
D6Oda24	6	114024174 to 114024319	145		DNA segment	DNA segment, Chr 6, Sen-ichi Oda 24
Cpgi17858	6	114041268 to 114042685	1417		CpG island	CpG island 17858
Tssr62483	6	114041953 to 114042003	50	-	TSS region	transcription start site region 62483
Tssr62484	6	114042020 to 114042097	77	-	TSS region	transcription start site region 62484