Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 6:113408699-113520758

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48 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ttll3 6 113389260 to 113414587 25327 + protein coding gene tubulin tyrosine ligase-like family, member 3
Rpusd3 6 113415319 to 113419340 4021 - protein coding gene RNA pseudouridylate synthase domain containing 3
Gm44280 6 113416472 to 113419582 3110 + unclassified gene predicted gene, 44280
Cpgi17843 6 113418939 to 113419496 557 CpG island CpG island 17843
Tssr62445 6 113419317 to 113419352 35 - TSS region transcription start site region 62445
Gm24387 6 113422150 to 113422239 89 + miRNA gene predicted gene, 24387
Cidec 6 113424634 to 113435760 11126 - protein coding gene cell death-inducing DFFA-like effector c
Tssr62446 6 113431985 to 113431991 6 - TSS region transcription start site region 62446
Tssr62447 6 113434499 to 113434514 15 - TSS region transcription start site region 62447
Gm52871 6 113434505 to 113437598 3093 + lncRNA gene predicted gene, 52871
Tssr62448 6 113434529 to 113434546 17 - TSS region transcription start site region 62448
Tssr62449 6 113434757 to 113434770 13 - TSS region transcription start site region 62449
Tssr62450 6 113434777 to 113434788 11 - TSS region transcription start site region 62450
Tssr62451 6 113434800 to 113434807 7 - TSS region transcription start site region 62451
Tssr58211 6 113434892 to 113434906 14 + TSS region transcription start site region 58211
Tssr62452 6 113435748 to 113435764 16 - TSS region transcription start site region 62452
Gm43928 6 113440486 to 113440894 408 - pseudogene predicted gene, 43928
Cpgi17844 6 113442382 to 113443108 726 CpG island CpG island 17844
Jagn1 6 113442569 to 113448229 5660 + protein coding gene jagunal homolog 1
Tssr58212 6 113442571 to 113442627 56 + TSS region transcription start site region 58212
Tssr58213 6 113442628 to 113442635 7 + TSS region transcription start site region 58213
Il17re 6 113458699 to 113470758 12059 + protein coding gene interleukin 17 receptor E
Tssr58214 6 113458765 to 113458836 71 + TSS region transcription start site region 58214
Gm52872 6 113467953 to 113469604 1651 - lncRNA gene predicted gene, 52872
Cpgi17845 6 113469267 to 113470265 998 CpG island CpG island 17845
Il17rc 6 113471455 to 113483163 11708 + protein coding gene interleukin 17 receptor C
Tssr58215 6 113471464 to 113471475 11 + TSS region transcription start site region 58215
Tssr58216 6 113471481 to 113471513 32 + TSS region transcription start site region 58216
Tssr58217 6 113471515 to 113471540 25 + TSS region transcription start site region 58217
Tssr58218 6 113472259 to 113472269 10 + TSS region transcription start site region 58218
Tssr58219 6 113472276 to 113472291 15 + TSS region transcription start site region 58219
Cpgi17846 6 113482377 to 113483473 1096 CpG island CpG island 17846
Tssr62453 6 113483156 to 113483168 12 - TSS region transcription start site region 62453
Tssr62454 6 113483170 to 113483185 15 - TSS region transcription start site region 62454
Tssr58220 6 113483298 to 113483316 18 + TSS region transcription start site region 58220
Tssr58221 6 113483329 to 113483366 37 + TSS region transcription start site region 58221
Creld1 6 113483356 to 113493343 9987 + protein coding gene cysteine-rich with EGF-like domains 1
Tssr58222 6 113483412 to 113483435 23 + TSS region transcription start site region 58222
Tssr58223 6 113483449 to 113483473 24 + TSS region transcription start site region 58223
Tssr58224 6 113483513 to 113483524 11 + TSS region transcription start site region 58224
Tssr58225 6 113483528 to 113483571 43 + TSS region transcription start site region 58225
Tssr58226 6 113483584 to 113483618 34 + TSS region transcription start site region 58226
Prrt3 6 113493639 to 113501931 8292 - protein coding gene proline-rich transmembrane protein 3
Cpgi17847 6 113494216 to 113495458 1242 CpG island CpG island 17847
Cpgi17848 6 113501646 to 113502113 467 CpG island CpG island 17848
Tssr62455 6 113501877 to 113501949 72 - TSS region transcription start site region 62455
Tssr62456 6 113501950 to 113501963 13 - TSS region transcription start site region 62456
Emc3 6 113514887 to 113531638 16751 - protein coding gene ER membrane protein complex subunit 3