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Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:74104816-74631742

39 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Cpgi15969	5	74126426 to 74126672	246		CpG island	CpG island 15969
Gm32002	5	74160683 to 74165284	4601	+	lncRNA gene	predicted gene, 32002
A330058E17Rik	5	74172161 to 74176050	3889	-	unclassified gene	RIKEN cDNA A330058E17 gene
Cpgi15970	5	74194675 to 74195946	1271		CpG island	CpG island 15970
Tssr46670	5	74195281 to 74195294	13	+	TSS region	transcription start site region 46670
Rasl11b	5	74195326 to 74199477	4151	+	protein coding gene	RAS-like, family 11, member B
D5Buc50	5	74202136 to 74202410	274		DNA segment	DNA segment, Chr 5, Bucan 50
Scfd2	5	74204816 to 74531742	326926	-	protein coding gene	Sec1 family domain containing 2
D5Buc51	5	74236964 to 74237184	220		DNA segment	DNA segment, Chr 5, Bucan 51
Gm42599	5	74249148 to 74249616	468	-	unclassified gene	predicted gene 42599
Tssr51381	5	74262684 to 74262707	23	-	TSS region	transcription start site region 51381
Tssr51382	5	74262710 to 74262722	12	-	TSS region	transcription start site region 51382
Gm32064	5	74309332 to 74359666	50334	+	lncRNA gene	predicted gene, 32064
Gm15981	5	74316578 to 74317034	456	-	pseudogene	predicted gene 15981
Tssr46671	5	74337702 to 74337709	7	+	TSS region	transcription start site region 46671
Gm15982	5	74356583 to 74358419	1836	-	pseudogene	predicted gene 15982
6720475M21Rik	5	74367163 to 74369915	2752	-	unclassified gene	RIKEN cDNA 6720475M21 gene
Tssr46672	5	74386432 to 74386435	3	+	TSS region	transcription start site region 46672
Tssr51383	5	74395644 to 74395647	3	-	TSS region	transcription start site region 51383
Tssr46673	5	74402992 to 74402998	6	+	TSS region	transcription start site region 46673
Tssr51384	5	74405095 to 74405132	37	-	TSS region	transcription start site region 51384
Gm43167	5	74429500 to 74431105	1605	-	unclassified gene	predicted gene 43167
D5Jcs311	5	74435247 to 74435470	223		DNA segment	DNA segment, Chr 5, John C. Schimenti 311
D5B6CS103	5	74492140 to 74492306	166		DNA segment	DNA segment, Chr 5, B6CS 103
Cpgi15971	5	74530771 to 74531935	1164		CpG island	CpG island 15971
Tssr51385	5	74531666 to 74531754	88	-	TSS region	transcription start site region 51385
Cpgi15972	5	74535309 to 74536151	842		CpG island	CpG island 15972
Fip1l1	5	74535449 to 74598800	63351	+	protein coding gene	FIP1 like 1 (S. cerevisiae)
Tssr46674	5	74535466 to 74535524	58	+	TSS region	transcription start site region 46674
Tssr46675	5	74535535 to 74535558	23	+	TSS region	transcription start site region 46675
Tssr46676	5	74535641 to 74535691	50	+	TSS region	transcription start site region 46676
Tssr46677	5	74572493 to 74572510	17	+	TSS region	transcription start site region 46677
Gm43747	5	74575947 to 74577276	1329	+	unclassified gene	predicted gene 43747
Tssr46678	5	74581246 to 74581249	3	+	TSS region	transcription start site region 46678
Tssr46679	5	74581568 to 74581572	4	+	TSS region	transcription start site region 46679
Lnx1	5	74592447 to 74702912	110465	-	protein coding gene	ligand of numb-protein X 1
Tssr46680	5	74614502 to 74614503	1	+	TSS region	transcription start site region 46680
D5Jcs312	5	74626319 to 74626515	196		DNA segment	DNA segment, Chr 5, John C. Schimenti 312
Recrq8	5	132500000 to 74300000	-58200000		QTL	recombination rate in male meiosis QTL 8