Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:5559278-5684232

19 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gtpbp10	5	5537454 to 5559538	22084	-	protein coding gene	GTP-binding protein 10 (putative)
Cpgi15521	5	5559176 to 5559804	628		CpG island	CpG island 15521
Tssr50057	5	5559501 to 5559517	16	-	TSS region	transcription start site region 50057
Tssr50058	5	5559521 to 5559545	24	-	TSS region	transcription start site region 50058
Gm30652	5	5567328 to 5567757	429	+	pseudogene	predicted gene, 30652
Gm8773	5	5573799 to 5576203	2404	+	lincRNA gene	predicted gene 8773
Cpgi15522	5	5573814 to 5574328	514		CpG island	CpG island 15522
Tssr45092	5	5573994 to 5574013	19	+	TSS region	transcription start site region 45092
Cfap69	5	5579278 to 5664239	84961	-	protein coding gene	cilia and flagella associated protein 69
n-TUtca1	5	5627681 to 5627751	70	+	tRNA gene	nuclear encoded tRNA selenocysteine 1 (anticodon TCA)
Tssr1417	5	5644794 to 5644795	1	+	TSS region	transcription start site region 1417
Tssr50059	5	5663207 to 5663221	14	-	TSS region	transcription start site region 50059
Tssr50060	5	5663263 to 5663294	31	-	TSS region	transcription start site region 50060
Cpgi15523	5	5663755 to 5664386	631		CpG island	CpG island 15523
Tssr50061	5	5664176 to 5664181	5	-	TSS region	transcription start site region 50061
Tssr50062	5	5664183 to 5664192	9	-	TSS region	transcription start site region 50062
Tssr50063	5	5664196 to 5664253	57	-	TSS region	transcription start site region 50063
Gm40262	5	5664289 to 5716533	52244	+	lncRNA gene	predicted gene, 40262
Steap2	5	5664829 to 5694568	29739	-	protein coding gene	six transmembrane epithelial antigen of prostate 2