Gene symbol |
Chromo- some |
Coordinates (bp, mm10) |
Size (bp) |
Strand |
Feature Type |
Gene name |
---|---|---|---|---|---|---|
Fam133b | 5 | 26405 | + | protein coding gene | family with sequence similarity 133, member B | |
Tssr45054 | 5 | 14 | + | TSS region | transcription start site region 45054 | |
Tssr45055 | 5 | 13 | + | TSS region | transcription start site region 45055 | |
n-R5s169 | 5 | 119 | + | rRNA gene | nuclear encoded rRNA 5S 169 | |
Tssr1413 | 5 | 4 | + | TSS region | transcription start site region 1413 | |
Tssr45056 | 5 | 8 | + | TSS region | transcription start site region 45056 | |
Tssr45057 | 5 | 20 | + | TSS region | transcription start site region 45057 | |
Tssr45058 | 5 | 7 | + | TSS region | transcription start site region 45058 | |
Tssr45059 | 5 | 16 | + | TSS region | transcription start site region 45059 | |
1700109H08Rik | 5 | 12625 | + | protein coding gene | RIKEN cDNA 1700109H08 gene | |
4833441D16Rik | 5 | 493 | unclassified gene | RIKEN cDNA 4833441D16 gene | ||
Tssr45060 | 5 | 16 | + | TSS region | transcription start site region 45060 | |
Rbm48 | 5 | 12569 | - | protein coding gene | RNA binding motif protein 48 | |
2510017J16Rik | 5 | 1262 | + | antisense lncRNA gene | RIKEN cDNA 2510017J16 gene | |
Cpgi15510 | 5 | 1098 | CpG island | CpG island 15510 | ||
Pex1 | 5 | 41164 | + | protein coding gene | peroxisomal biogenesis factor 1 | |
Tssr49988 | 5 | 47 | - | TSS region | transcription start site region 49988 | |
Tssr45061 | 5 | 52 | + | TSS region | transcription start site region 45061 | |
Tssr45062 | 5 | 87 | + | TSS region | transcription start site region 45062 | |
Tssr49989 | 5 | 39 | - | TSS region | transcription start site region 49989 | |
Gm43825 | 5 | 733 | - | antisense lncRNA gene | predicted gene 43825 | |
4833413G10Rik | 5 | 1945 | - | antisense lncRNA gene | RIKEN cDNA 4833413G10 gene | |
Gatad1 | 5 | 7975 | - | protein coding gene | GATA zinc finger domain containing 1 | |
Tssr49990 | 5 | 4 | - | TSS region | transcription start site region 49990 | |
Tssr49991 | 5 | 39 | - | TSS region | transcription start site region 49991 | |
Cpgi15511 | 5 | 952 | CpG island | CpG island 15511 | ||
Tssr49992 | 5 | 13 | - | TSS region | transcription start site region 49992 | |
Tssr49993 | 5 | 171 | - | TSS region | transcription start site region 49993 | |
Tssr49994 | 5 | 25 | - | TSS region | transcription start site region 49994 | |
Tssr49995 | 5 | 29 | - | TSS region | transcription start site region 49995 | |
Gm26238 | 5 | 116 | + | miRNA gene | predicted gene, 26238 | |
Tmbim7 | 5 | 22861 | + | protein coding gene | transmembrane BAX inhibitor motif containing 7 | |
Tssr49996 | 5 | 13 | - | TSS region | transcription start site region 49996 | |
Tssr45063 | 5 | 14 | + | TSS region | transcription start site region 45063 | |
Tssr45064 | 5 | 18 | + | TSS region | transcription start site region 45064 | |
Tssr45065 | 5 | 5 | + | TSS region | transcription start site region 45065 | |
Ankib1 | 5 | 112925 | - | protein coding gene | ankyrin repeat and IBR domain containing 1 | |
Gm22926 | 5 | 67 | + | miRNA gene | predicted gene, 22926 | |
Cpgi15512 | 5 | 209 | CpG island | CpG island 15512 | ||
D5Mit330 | 5 | 91 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 330 | ||
Gm43679 | 5 | 3676 | - | unclassified gene | predicted gene 43679 | |
Cpgi15513 | 5 | 1657 | CpG island | CpG island 15513 | ||
Tssr49997 | 5 | 17 | - | TSS region | transcription start site region 49997 | |
Tssr49998 | 5 | 17 | - | TSS region | transcription start site region 49998 | |
Tssr49999 | 5 | 38 | - | TSS region | transcription start site region 49999 | |
Tssr45066 | 5 | 33 | + | TSS region | transcription start site region 45066 | |
Krit1 | 5 | 41350 | + | protein coding gene | KRIT1, ankyrin repeat containing | |
Tssr45067 | 5 | 11 | + | TSS region | transcription start site region 45067 | |
Tssr1414 | 5 | 11 | + | TSS region | transcription start site region 1414 | |
Tssr45068 | 5 | 4 | + | TSS region | transcription start site region 45068 | |
Cpgi15514 | 5 | 504 | CpG island | CpG island 15514 | ||
Tssr50000 | 5 | 33 | - | TSS region | transcription start site region 50000 | |
Tssr45069 | 5 | 21 | + | TSS region | transcription start site region 45069 | |
Lrrd1 | 5 | 21423 | + | protein coding gene | leucine rich repeats and death domain containing 1 | |
Tssr45070 | 5 | 7 | + | TSS region | transcription start site region 45070 | |
Rps4x-ps | 5 | 792 | + | pseudogene | Rps4x retrotransposed pseudogene | |
Mterf1a | 5 | 3352 | - | protein coding gene | mitochondrial transcription termination factor 1a | |
Tssr45071 | 5 | 9 | + | TSS region | transcription start site region 45071 | |
Tssr45072 | 5 | 11 | + | TSS region | transcription start site region 45072 | |
Tssr1415 | 5 | 11 | + | TSS region | transcription start site region 1415 | |
Tssr45073 | 5 | 22 | + | TSS region | transcription start site region 45073 | |
Akap9 | 5 | 152377 | + | protein coding gene | A kinase (PRKA) anchor protein (yotiao) 9 | |
Tssr45074 | 5 | 31 | + | TSS region | transcription start site region 45074 | |
Cpgi15515 | 5 | 1127 | CpG island | CpG island 15515 | ||
Tssr45075 | 5 | 70 | + | TSS region | transcription start site region 45075 | |
Tssr45076 | 5 | 33 | + | TSS region | transcription start site region 45076 | |
Tssr45077 | 5 | 4 | + | TSS region | transcription start site region 45077 | |
Tssr45078 | 5 | 18 | + | TSS region | transcription start site region 45078 | |
Tssr45079 | 5 | 4 | + | TSS region | transcription start site region 45079 | |
Wdr46-ps | 5 | 1700 | + | pseudogene | Wdr46 retrotransposed pseudogene | |
Tssr45080 | 5 | 2 | + | TSS region | transcription start site region 45080 | |
Tssr45081 | 5 | 22 | + | TSS region | transcription start site region 45081 | |
Tssr45082 | 5 | 14 | + | TSS region | transcription start site region 45082 | |
Tssr45083 | 5 | 14 | + | TSS region | transcription start site region 45083 | |
Tssr45084 | 5 | 18 | + | TSS region | transcription start site region 45084 | |
Gm40260 | 5 | 4415 | - | lncRNA gene | predicted gene, 40260 | |
Gm43031 | 5 | 1886 | + | sense intronic lncRNA gene | predicted gene 43031 | |
Cyp51 | 5 | 23601 | - | protein coding gene | cytochrome P450, family 51 | |
Cpgi15516 | 5 | 1434 | CpG island | CpG island 15516 | ||
Tssr50001 | 5 | 52 | - | TSS region | transcription start site region 50001 | |
Tssr50002 | 5 | 15 | - | TSS region | transcription start site region 50002 | |
Tssr50003 | 5 | 9 | - | TSS region | transcription start site region 50003 | |
Tssr50004 | 5 | 26 | - | TSS region | transcription start site region 50004 | |
Tssr50005 | 5 | 11 | - | TSS region | transcription start site region 50005 | |
Tssr50006 | 5 | 138 | - | TSS region | transcription start site region 50006 | |
Tssr50007 | 5 | 19 | - | TSS region | transcription start site region 50007 | |
Mterf1b | 5 | 5284 | + | protein coding gene | mitochondrial transcription termination factor 1b | |
Pbwg14 | 5 | 97 | QTL | postnatal body weight growth 14 | ||
D5Mit345 | 5 | 97 | DNA segment | DNA Segment, Chr 5, Massachusetts Institute of Technology 345 | ||
D5Mit193 | 5 | 135 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 193 | ||
D5Mit331 | 5 | 106 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 331 | ||
Gm40261 | 5 | 44701 | + | lncRNA gene | predicted gene, 40261 | |
Tssr45085 | 5 | 4 | + | TSS region | transcription start site region 45085 | |
Tssr45086 | 5 | 5 | + | TSS region | transcription start site region 45086 | |
D5Mit249 | 5 | 142 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 249 | ||
Fzd1 | 5 | 4196 | - | protein coding gene | frizzled class receptor 1 | |
Cpgi15517 | 5 | 2622 | CpG island | CpG island 15517 | ||
Tssr50008 | 5 | 9 | - | TSS region | transcription start site region 50008 | |
Tssr50009 | 5 | 12 | - | TSS region | transcription start site region 50009 | |
Tssr50010 | 5 | 12 | - | TSS region | transcription start site region 50010 | |
Tssr50011 | 5 | 10 | - | TSS region | transcription start site region 50011 | |
Tssr50012 | 5 | 18 | - | TSS region | transcription start site region 50012 | |
Tssr50013 | 5 | 23 | - | TSS region | transcription start site region 50013 | |
Tssr50014 | 5 | 19 | - | TSS region | transcription start site region 50014 | |
Gm15750 | 5 | 831 | + | pseudogene | predicted gene 15750 | |
Tssr50015 | 5 | 1 | - | TSS region | transcription start site region 50015 | |
Gm42744 | 5 | 14341 | - | lincRNA gene | predicted gene 42744 | |
Tssr50016 | 5 | 5 | - | TSS region | transcription start site region 50016 | |
Gm44483 | 5 | 96 | + | miRNA gene | predicted gene, 44483 | |
Cdk14 | 5 | 576867 | - | protein coding gene | cyclin-dependent kinase 14 | |
Tssr50017 | 5 | 5 | - | TSS region | transcription start site region 50017 | |
Tssr50018 | 5 | 17 | - | TSS region | transcription start site region 50018 | |
Gm43112 | 5 | 3121 | - | sense intronic lncRNA gene | predicted gene 43112 | |
Gm43113 | 5 | 1753 | - | sense intronic lncRNA gene | predicted gene 43113 | |
Tssr50019 | 5 | 36 | - | TSS region | transcription start site region 50019 | |
Gm25037 | 5 | 109 | - | miRNA gene | predicted gene, 25037 | |
Gm43111 | 5 | 1918 | - | sense intronic lncRNA gene | predicted gene 43111 | |
Tssr50020 | 5 | 11 | - | TSS region | transcription start site region 50020 | |
D5Mit346.1 | 5 | 127 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 346.1 | ||
D5Mit346 | 5 | 119 | DNA segment | DNA Segment, Chr 5, Massachusetts Institute of Technology 346 | ||
Eye1 | 5 | 119 | QTL | eye weight 1 | ||
Gm22897 | 5 | 126 | - | snoRNA gene | predicted gene, 22897 | |
D5Mit343.2 | 5 | 151 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 343.2 | ||
Tssr50021 | 5 | 34 | - | TSS region | transcription start site region 50021 | |
Tssr50022 | 5 | 4 | - | TSS region | transcription start site region 50022 | |
Tssr50023 | 5 | 4 | - | TSS region | transcription start site region 50023 | |
Gm43623 | 5 | 2662 | - | unclassified non-coding RNA gene | predicted gene 43623 | |
Gm43577 | 5 | 3343 | - | sense intronic lncRNA gene | predicted gene 43577 | |
Gm10484 | 5 | 4758 | - | sense intronic lncRNA gene | predicted gene 10484 | |
D5Mit49 | 5 | 131 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 49 | ||
Tssr50024 | 5 | 4 | - | TSS region | transcription start site region 50024 | |
Tssr50025 | 5 | 23 | - | TSS region | transcription start site region 50025 | |
Tssr50026 | 5 | 10 | - | TSS region | transcription start site region 50026 | |
Tssr50027 | 5 | 14 | - | TSS region | transcription start site region 50027 | |
Tssr50028 | 5 | 1 | - | TSS region | transcription start site region 50028 | |
Tssr50029 | 5 | 21 | - | TSS region | transcription start site region 50029 | |
Tssr50030 | 5 | 5 | - | TSS region | transcription start site region 50030 | |
Tssr50031 | 5 | 16 | - | TSS region | transcription start site region 50031 | |
Tssr50032 | 5 | 64 | - | TSS region | transcription start site region 50032 | |
Tssr50033 | 5 | 45 | - | TSS region | transcription start site region 50033 | |
Gm43727 | 5 | 2646 | - | sense intronic lncRNA gene | predicted gene 43727 | |
Gm43728 | 5 | 2621 | - | sense intronic lncRNA gene | predicted gene 43728 | |
Tssr50034 | 5 | 11 | - | TSS region | transcription start site region 50034 | |
Tssr50035 | 5 | 10 | - | TSS region | transcription start site region 50035 | |
Tssr50036 | 5 | 13 | - | TSS region | transcription start site region 50036 | |
D5Mit344 | 5 | 112 | DNA segment | DNA Segment, Chr 5, Massachusetts Institute of Technology 344 | ||
Tssr50037 | 5 | 37 | - | TSS region | transcription start site region 50037 | |
Tssr50038 | 5 | 18 | - | TSS region | transcription start site region 50038 | |
Tssr50039 | 5 | 3 | - | TSS region | transcription start site region 50039 | |
Tssr50040 | 5 | 1 | - | TSS region | transcription start site region 50040 | |
Tssr50041 | 5 | 24 | - | TSS region | transcription start site region 50041 | |
Gm30151 | 5 | 4551 | + | lncRNA gene | predicted gene, 30151 | |
Tssr50042 | 5 | 14 | - | TSS region | transcription start site region 50042 | |
Cpgi15518 | 5 | 1395 | CpG island | CpG island 15518 | ||
Tssr50043 | 5 | 5 | - | TSS region | transcription start site region 50043 | |
Tssr50044 | 5 | 15 | - | TSS region | transcription start site region 50044 | |
Tssr50045 | 5 | 44 | - | TSS region | transcription start site region 50045 | |
Tssr50046 | 5 | 11 | - | TSS region | transcription start site region 50046 | |
Tssr50047 | 5 | 75 | - | TSS region | transcription start site region 50047 | |
Gm30267 | 5 | 2364 | + | lncRNA gene | predicted gene, 30267 | |
Tssr45087 | 5 | 12 | + | TSS region | transcription start site region 45087 | |
Tssr50048 | 5 | 18 | - | TSS region | transcription start site region 50048 | |
Tssr1416 | 5 | 53 | - | TSS region | transcription start site region 1416 | |
Tssr45088 | 5 | 3 | + | TSS region | transcription start site region 45088 | |
1700015F17Rik | 5 | 41316 | - | protein coding gene | RIKEN cDNA 1700015F17 gene | |
Tssr50049 | 5 | 20 | - | TSS region | transcription start site region 50049 | |
Tssr50050 | 5 | 12 | - | TSS region | transcription start site region 50050 | |
Tssr50051 | 5 | 30 | - | TSS region | transcription start site region 50051 | |
Tssr50052 | 5 | 16 | - | TSS region | transcription start site region 50052 | |
Gm30325 | 5 | 14910 | + | lncRNA gene | predicted gene, 30325 | |
Tssr45089 | 5 | 12 | + | TSS region | transcription start site region 45089 | |
Tssr45090 | 5 | 3 | + | TSS region | transcription start site region 45090 | |
Tssr45091 | 5 | 8 | + | TSS region | transcription start site region 45091 | |
Cldn12 | 5 | 9961 | - | protein coding gene | claudin 12 | |
Cpgi15519 | 5 | 239 | CpG island | CpG island 15519 | ||
Cpgi15520 | 5 | 937 | CpG island | CpG island 15520 | ||
Tssr50053 | 5 | 22 | - | TSS region | transcription start site region 50053 | |
Tssr50054 | 5 | 22 | - | TSS region | transcription start site region 50054 | |
Tssr50055 | 5 | 14 | - | TSS region | transcription start site region 50055 | |
Tssr50056 | 5 | 12 | - | TSS region | transcription start site region 50056 | |
Gtpbp10 | 5 | 22084 | - | protein coding gene | GTP-binding protein 10 (putative) | |
Cpgi15521 | 5 | 628 | CpG island | CpG island 15521 | ||
Tssr50057 | 5 | 16 | - | TSS region | transcription start site region 50057 | |
Tssr50058 | 5 | 24 | - | TSS region | transcription start site region 50058 | |
Gm30652 | 5 | 429 | + | pseudogene | predicted gene, 30652 | |
Gm8773 | 5 | 2404 | + | lincRNA gene | predicted gene 8773 | |
Cpgi15522 | 5 | 514 | CpG island | CpG island 15522 | ||
Tssr45092 | 5 | 19 | + | TSS region | transcription start site region 45092 | |
Cfap69 | 5 | 84961 | - | protein coding gene | cilia and flagella associated protein 69 | |
n-TUtca1 | 5 | 70 | + | tRNA gene | nuclear encoded tRNA selenocysteine 1 (anticodon TCA) | |
Tssr1417 | 5 | 1 | + | TSS region | transcription start site region 1417 | |
Tssr50059 | 5 | 14 | - | TSS region | transcription start site region 50059 | |
Tssr50060 | 5 | 31 | - | TSS region | transcription start site region 50060 | |
Cpgi15523 | 5 | 631 | CpG island | CpG island 15523 | ||
Tssr50061 | 5 | 5 | - | TSS region | transcription start site region 50061 | |
Tssr50062 | 5 | 9 | - | TSS region | transcription start site region 50062 | |
Tssr50063 | 5 | 57 | - | TSS region | transcription start site region 50063 | |
Gm40262 | 5 | 52244 | + | lncRNA gene | predicted gene, 40262 | |
Steap2 | 5 | 29739 | - | protein coding gene | six transmembrane epithelial antigen of prostate 2 | |
D5Mit417 | 5 | 145 | DNA segment | DNA segment, Chr 5, Massachusetts Institute of Technology 417 |