Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 5:33197778-33411141

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29 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
D5Mit419 5 33212244 to 33212367 123 DNA segment DNA Segment, Chr 5, Massachusetts Institute of Technology 419
Spon2 5 33213518 to 33218254 4736 - protein coding gene spondin 2, extracellular matrix protein
Tssr50597 5 33218160 to 33218222 62 - TSS region transcription start site region 50597
Tssr50598 5 33218229 to 33218243 14 - TSS region transcription start site region 50598
Ctbp1 5 33247723 to 33274994 27271 - protein coding gene C-terminal binding protein 1
Gm43850 5 33255318 to 33256362 1044 + pseudogene predicted gene 43850
Tssr50599 5 33270641 to 33270660 19 - TSS region transcription start site region 50599
Cpgi15729 5 33273894 to 33275509 1615 CpG island CpG island 15729
Tssr50600 5 33274954 to 33274965 11 - TSS region transcription start site region 50600
Tssr50601 5 33274966 to 33275010 44 - TSS region transcription start site region 50601
Tssr45813 5 33288059 to 33288063 4 + TSS region transcription start site region 45813
Gm20465 5 33297778 to 33311141 13363 - lncRNA gene predicted gene 20465
Del(5D5Mit388-D5Mit351)4Jcs 5 33318099 to 37019120 3701021 chromosomal deletion deletion, Chr 5, John C. Schimenti 4
D5Mit388 5 33318099 to 33318293 194 DNA segment DNA Segment, Chr 5 Massachusetts Institute of Technology 388
Mom5 5 33318293 to 8797672 -24520621 QTL modifier of Min 5
Cpgi15730 5 33335087 to 33336318 1231 CpG island CpG island 15730
Tssr45814 5 33335540 to 33335571 31 + TSS region transcription start site region 45814
Maea 5 33335572 to 33373294 37722 + protein coding gene macrophage erythroblast attacher
Tssr50602 5 33335796 to 33335804 8 - TSS region transcription start site region 50602
Tssr45815 5 33336227 to 33336254 27 + TSS region transcription start site region 45815
Tssr45816 5 33336270 to 33336281 11 + TSS region transcription start site region 45816
Tssr45817 5 33337056 to 33337060 4 + TSS region transcription start site region 45817
D5Jcs35 5 33353697 to 33353843 146 DNA segment DNA segment, Chr 5, John C. Schimenti 35
Tssr45818 5 33368693 to 33368718 25 + TSS region transcription start site region 45818
Tssr45819 5 33371684 to 33371721 37 + TSS region transcription start site region 45819
Cpgi15731 5 33377871 to 33379113 1242 CpG island CpG island 15731
Tssr45820 5 33378529 to 33378584 55 + TSS region transcription start site region 45820
Uvssa 5 33378549 to 33419754 41205 + protein coding gene UV stimulated scaffold protein A
Tssr45821 5 33378729 to 33378798 69 + TSS region transcription start site region 45821