Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:146060538-146260554

32 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Del(5Cyp3a57-Cyp3a59)1Ahs	5	145345279 to 146113287	768008		chromosomal deletion	deletion, Chr 5, Alfred H Schinkel 1
Del(5Cyp3a57-Cyp3a59)1Arte	5	145345279 to 146113287	768008		chromosomal deletion	deletion, Chr5, TaconicArtemis 1
Del(5Cyp3a57-Cyp3a59)1Mtos	5	145345279 to 146113287	768008		chromosomal deletion	deletion, Chr 5, Mitsuo Oshimura 1
Tssr1750	5	146070230 to 146070246	16	-	TSS region	transcription start site region 1750
Gm8458	5	146070906 to 146071724	818	+	pseudogene	predicted gene 8458
Tssr49765	5	146079167 to 146079188	21	+	TSS region	transcription start site region 49765
Tssr49766	5	146079254 to 146079258	4	+	TSS region	transcription start site region 49766
Cyp3a59	5	146079257 to 146113287	34030	+	protein coding gene	cytochrome P450, family 3, subfamily a, polypeptide 59
Tssr49767	5	146109203 to 146109214	11	+	TSS region	transcription start site region 49767
Gm5565	5	146157912 to 146160575	2663	-	protein coding gene	predicted gene 5565
Tssr54468	5	146160538 to 146160554	16	-	TSS region	transcription start site region 54468
Gm6309	5	146168029 to 146170763	2734	-	protein coding gene	predicted gene 6309
1700001J03Rik	5	146182450 to 146185304	2854	-	protein coding gene	RIKEN cDNA 1700001J03 gene
Tssr54469	5	146184294 to 146184317	23	-	TSS region	transcription start site region 54469
Tssr54470	5	146185312 to 146185320	8	-	TSS region	transcription start site region 54470
B230303O12Rik	5	146188620 to 146194809	6189	-	lincRNA gene	RIKEN cDNA B230303O12 gene
Cyp3a60-ps	5	146197188 to 146198007	819	+	pseudogene	cytochrome P450, family 3, subfamily a, member 60, pseudogene
Gm34248	5	146199985 to 146200458	473	-	pseudogene	predicted gene, 34248
Gm43625	5	146203251 to 146204789	1538	-	lincRNA gene	predicted gene 43625
Rnf6	5	146209193 to 146221457	12264	-	protein coding gene	ring finger protein (C3H2C3 type) 6
Tssr54471	5	146209642 to 146209685	43	-	TSS region	transcription start site region 54471
Cpgi17025	5	146220668 to 146221677	1009		CpG island	CpG island 17025
Tssr54472	5	146220906 to 146220987	81	-	TSS region	transcription start site region 54472
Tssr54473	5	146221391 to 146221420	29	-	TSS region	transcription start site region 54473
Tssr54474	5	146221426 to 146221444	18	-	TSS region	transcription start site region 54474
Gm38745	5	146223717 to 146229035	5318	+	lncRNA gene	predicted gene, 38745
Cpgi17026	5	146230813 to 146232014	1201		CpG island	CpG island 17026
Tssr49768	5	146231163 to 146231186	23	+	TSS region	transcription start site region 49768
Tssr49769	5	146231211 to 146231274	63	+	TSS region	transcription start site region 49769
Cdk8	5	146231230 to 146302874	71644	+	protein coding gene	cyclin-dependent kinase 8
6030446M11Rik	5	146242998 to 146243865	867		unclassified gene	RIKEN cDNA 6030446M11 gene
Gm15739	5	146248551 to 146249422	871	+	pseudogene	predicted gene 15739