MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 5:134627533-134687582

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17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Eif4h	5	134619872 to 134639409	19537	-	protein coding gene	eukaryotic translation initiation factor 4H
Tssr53658	5	134627707 to 134627750	43	-	TSS region	transcription start site region 53658
Tssr53659	5	134631785 to 134631787	2	-	TSS region	transcription start site region 53659
Cpgi16725	5	134638505 to 134639873	1368		CpG island	CpG island 16725
Tssr53660	5	134639028 to 134639044	16	-	TSS region	transcription start site region 53660
Tssr53661	5	134639311 to 134639348	37	-	TSS region	transcription start site region 53661
Tssr53662	5	134639473 to 134639480	7	-	TSS region	transcription start site region 53662
Tssr53663	5	134639486 to 134639522	36	-	TSS region	transcription start site region 53663
Tssr53664	5	134639541 to 134639546	5	-	TSS region	transcription start site region 53664
Del(5Limk1-Trim50)2Uta	5	134656039 to 135368005	711966		chromosomal deletion	deletion, Chr 5, Uta Francke 2
Limk1	5	134656039 to 134688598	32559	-	protein coding gene	LIM-domain containing, protein kinase
Tssr53665	5	134657533 to 134657582	49	-	TSS region	transcription start site region 53665
Tssr53666	5	134670367 to 134670395	28	-	TSS region	transcription start site region 53666
Gm10369	5	134676490 to 134680145	3655	+	antisense lncRNA gene	predicted gene 10369
Tssr49098	5	134676544 to 134676563	19	+	TSS region	transcription start site region 49098
Tssr49099	5	134676689 to 134676713	24	+	TSS region	transcription start site region 49099
Tssr53667	5	134678190 to 134678254	64	-	TSS region	transcription start site region 53667