Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:134200053-134249625

17 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gtf2ird2	5	134184019 to 134218146	34127	+	protein coding gene	GTF2I repeat domain containing 2
Gm24139	5	134204469 to 134204756	287	+	unclassified non-coding RNA gene	predicted gene, 24139
Cpgi16716	5	134216174 to 134217650	1476		CpG island	CpG island 16716
Ncf1	5	134220053 to 134229625	9572	-	protein coding gene	neutrophil cytosolic factor 1
Cpgi16717	5	134221536 to 134222588	1052		CpG island	CpG island 16717
Tssr53609	5	134221670 to 134221689	19	-	TSS region	transcription start site region 53609
Tssr53610	5	134222099 to 134222119	20	-	TSS region	transcription start site region 53610
Tssr49085	5	134227276 to 134227298	22	+	TSS region	transcription start site region 49085
Tssr53611	5	134228250 to 134228264	14	-	TSS region	transcription start site region 53611
Tssr53612	5	134229581 to 134229599	18	-	TSS region	transcription start site region 53612
Tssr53613	5	134231488 to 134231528	40	-	TSS region	transcription start site region 53613
Tssr53614	5	134232234 to 134232250	16	-	TSS region	transcription start site region 53614
Tssr53615	5	134232255 to 134232264	9	-	TSS region	transcription start site region 53615
Tssr53616	5	134236890 to 134236926	36	-	TSS region	transcription start site region 53616
Del(5Gtf2i-Limk1)1Uta	5	134237834 to 134688598	450764		chromosomal deletion	deletion, Chr 5, Uta Francke 1
Gtf2i	5	134237834 to 134314760	76926	-	protein coding gene	general transcription factor II I
Tssr53617	5	134244174 to 134244233	59	-	TSS region	transcription start site region 53617