Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:134174019-134228146

18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rcc1l	5	134148054 to 134176774	28720	-	protein coding gene	reculator of chromosome condensation 1 like
Cpgi16714	5	134175893 to 134176917	1024		CpG island	CpG island 16714
Tssr49083	5	134176340 to 134176376	36	+	TSS region	transcription start site region 49083
B230377A18Rik	5	134176346 to 134177709	1363	+	unclassified gene	RIKEN cDNA B230377A18 gene
Tssr53605	5	134176707 to 134176716	9	-	TSS region	transcription start site region 53605
Tssr53606	5	134176720 to 134176784	64	-	TSS region	transcription start site region 53606
Cpgi16715	5	134183725 to 134184779	1054		CpG island	CpG island 16715
Tssr49084	5	134183998 to 134184046	48	+	TSS region	transcription start site region 49084
Gtf2ird2	5	134184019 to 134218146	34127	+	protein coding gene	GTF2I repeat domain containing 2
Tssr53607	5	134184398 to 134184424	26	-	TSS region	transcription start site region 53607
Tssr53608	5	134184427 to 134184439	12	-	TSS region	transcription start site region 53608
Gm24139	5	134204469 to 134204756	287	+	unclassified non-coding RNA gene	predicted gene, 24139
Cpgi16716	5	134216174 to 134217650	1476		CpG island	CpG island 16716
Ncf1	5	134220053 to 134229625	9572	-	protein coding gene	neutrophil cytosolic factor 1
Cpgi16717	5	134221536 to 134222588	1052		CpG island	CpG island 16717
Tssr53609	5	134221670 to 134221689	19	-	TSS region	transcription start site region 53609
Tssr53610	5	134222099 to 134222119	20	-	TSS region	transcription start site region 53610
Tssr49085	5	134227276 to 134227298	22	+	TSS region	transcription start site region 49085