Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:123138401-123158597

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24 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
AI480526 5 123133723 to 123141666 7943 - lincRNA gene expressed sequence AI480526
Cpgi16576 5 123138507 to 123139347 840 CpG island CpG island 16576
Tssr48762 5 123138611 to 123138635 24 + TSS region transcription start site region 48762
Tssr48763 5 123138655 to 123138710 55 + TSS region transcription start site region 48763
4932422M17Rik 5 123138931 to 123141569 2638 + lincRNA gene RIKEN cDNA 4932422M17 gene
Tssr53209 5 123139073 to 123139090 17 - TSS region transcription start site region 53209
Tssr53210 5 123139969 to 123139980 11 - TSS region transcription start site region 53210
Tssr53211 5 123140100 to 123140125 25 - TSS region transcription start site region 53211
Tssr53212 5 123140135 to 123140149 14 - TSS region transcription start site region 53212
Tssr53213 5 123140711 to 123140731 20 - TSS region transcription start site region 53213
Tssr53214 5 123141079 to 123141094 15 - TSS region transcription start site region 53214
Tssr48764 5 123141224 to 123141240 16 + TSS region transcription start site region 48764
Tssr53215 5 123141280 to 123141333 53 - TSS region transcription start site region 53215
Cpgi16577 5 123141285 to 123143563 2278 CpG island CpG island 16577
Tssr53216 5 123141344 to 123141362 18 - TSS region transcription start site region 53216
Tssr48765 5 123141429 to 123141436 7 + TSS region transcription start site region 48765
Tssr48766 5 123142110 to 123142121 11 + TSS region transcription start site region 48766
Tssr48767 5 123142187 to 123142229 42 + TSS region transcription start site region 48767
Setd1b 5 123142193 to 123168629 26436 + protein coding gene SET domain containing 1B
Tssr48768 5 123142230 to 123142286 56 + TSS region transcription start site region 48768
Tssr48769 5 123148256 to 123148269 13 + TSS region transcription start site region 48769
Cpgi16578 5 123148401 to 123148597 196 CpG island CpG island 16578
Tssr53217 5 123150179 to 123150183 4 - TSS region transcription start site region 53217
Gm42024 5 123156531 to 123157065 534 - lncRNA gene predicted gene, 42024