Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:122737459-122871339

25 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Camkk2	5	122731170 to 122779409	48239	-	protein coding gene	calcium/calmodulin-dependent protein kinase kinase 2, beta
Tssr53147	5	122744929 to 122744948	19	-	TSS region	transcription start site region 53147
Cpgi16558	5	122763762 to 122764091	329		CpG island	CpG island 16558
Tssr53148	5	122763998 to 122764013	15	-	TSS region	transcription start site region 53148
Tssr53149	5	122771403 to 122771406	3	-	TSS region	transcription start site region 53149
Cpgi16559	5	122778502 to 122779870	1368		CpG island	CpG island 16559
Tssr53150	5	122779278 to 122779434	156	-	TSS region	transcription start site region 53150
Tssr53151	5	122779449 to 122779463	14	-	TSS region	transcription start site region 53151
Gm43684	5	122779525 to 122786097	6572	+	unclassified gene	predicted gene 43684
Tssr53152	5	122779616 to 122779676	60	-	TSS region	transcription start site region 53152
Anapc5	5	122787459 to 122821339	33880	-	protein coding gene	anaphase-promoting complex subunit 5
Cpgi16560	5	122820839 to 122821460	621		CpG island	CpG island 16560
Tssr48721	5	122820998 to 122821009	11	+	TSS region	transcription start site region 48721
Tssr53153	5	122821258 to 122821292	34	-	TSS region	transcription start site region 53153
Tssr53154	5	122821298 to 122821315	17	-	TSS region	transcription start site region 53154
Gm33044	5	122849628 to 122850136	508	-	lncRNA gene	predicted gene, 33044
Cpgi16561	5	122849792 to 122850923	1131		CpG island	CpG island 16561
Tssr53155	5	122849872 to 122849890	18	-	TSS region	transcription start site region 53155
Tssr48722	5	122850135 to 122850142	7	+	TSS region	transcription start site region 48722
Tssr48723	5	122850154 to 122850165	11	+	TSS region	transcription start site region 48723
Rnf34	5	122850162 to 122868945	18783	+	protein coding gene	ring finger protein 34
Tssr48724	5	122850167 to 122850178	11	+	TSS region	transcription start site region 48724
Tssr48725	5	122850186 to 122850198	12	+	TSS region	transcription start site region 48725
Tssr48726	5	122850199 to 122850214	15	+	TSS region	transcription start site region 48726
Kdm2b	5	122870664 to 122989162	118498	-	protein coding gene	lysine (K)-specific demethylase 2B