Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:114717408-114784588

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tchp 5 114707765 to 114722327 14562 + protein coding gene trichoplein, keratin filament binding
Cpgi16333 5 114718587 to 114718746 159 CpG island CpG island 16333
Mir7028 5 114719515 to 114719578 63 + miRNA gene microRNA 7028
Git2 5 114727408 to 114773522 46114 - protein coding gene GIT ArfGAP 2
Tssr52724 5 114730354 to 114730378 24 - TSS region transcription start site region 52724
Tssr52725 5 114733286 to 114733314 28 - TSS region transcription start site region 52725
Tssr52726 5 114744831 to 114744832 1 - TSS region transcription start site region 52726
Tssr52727 5 114761945 to 114761975 30 - TSS region transcription start site region 52727
Cpgi16334 5 114772625 to 114773690 1065 CpG island CpG island 16334
Tssr52728 5 114772650 to 114772665 15 - TSS region transcription start site region 52728
Tssr48097 5 114772895 to 114772897 2 + TSS region transcription start site region 48097
Tssr52729 5 114773357 to 114773370 13 - TSS region transcription start site region 52729
Tssr52730 5 114773372 to 114773472 100 - TSS region transcription start site region 52730
Tssr52731 5 114773488 to 114773517 29 - TSS region transcription start site region 52731
4930515G01Rik 5 114773737 to 114774983 1246 - antisense lncRNA gene RIKEN cDNA 4930515G01 gene
Cpgi16335 5 114774294 to 114775757 1463 CpG island CpG island 16335
Ankrd13a 5 114774923 to 114805821 30898 + protein coding gene ankyrin repeat domain 13a
Tssr48098 5 114774939 to 114774957 18 + TSS region transcription start site region 48098
Tssr48099 5 114775942 to 114775952 10 + TSS region transcription start site region 48099
Tssr1606 5 114777721 to 114777741 20 + TSS region transcription start site region 1606