Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 5:102807948-103311334

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40 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arhgap24 5 102481391 to 102897937 416546 + protein coding gene Rho GTPase activating protein 24
Tssr47539 5 102824014 to 102824017 3 + TSS region transcription start site region 47539
Tssr47540 5 102841052 to 102841057 5 + TSS region transcription start site region 47540
Tssr47541 5 102845110 to 102845115 5 + TSS region transcription start site region 47541
Tssr47542 5 102845116 to 102845127 11 + TSS region transcription start site region 47542
Tssr47543 5 102845138 to 102845146 8 + TSS region transcription start site region 47543
Tssr47544 5 102845150 to 102845200 50 + TSS region transcription start site region 47544
Tssr47545 5 102845233 to 102845249 16 + TSS region transcription start site region 47545
Cpgi16131 5 102845266 to 102845425 159 CpG island CpG island 16131
Tssr47546 5 102845271 to 102845292 21 + TSS region transcription start site region 47546
Tssr47547 5 102845300 to 102845328 28 + TSS region transcription start site region 47547
Tssr47548 5 102845330 to 102845338 8 + TSS region transcription start site region 47548
Tssr47549 5 102845382 to 102845410 28 + TSS region transcription start site region 47549
Tssr47550 5 102845941 to 102845978 37 + TSS region transcription start site region 47550
Tssr47551 5 102846008 to 102846042 34 + TSS region transcription start site region 47551
Tssr52144 5 102846311 to 102846318 7 - TSS region transcription start site region 52144
Tssr47552 5 102857336 to 102857340 4 + TSS region transcription start site region 47552
Tssr47553 5 102860045 to 102860054 9 + TSS region transcription start site region 47553
Tssr47554 5 102860098 to 102860120 22 + TSS region transcription start site region 47554
D5Mit64 5 102889149 to 102889302 153 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 64
D5Mit64.2 5 102889256 to 102889460 204 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 64.2
Cpgi16132 5 102892533 to 102892831 298 CpG island CpG island 16132
Mapk10 5 102908547 to 103211430 302883 - protein coding gene mitogen-activated protein kinase 10
Tssr52145 5 102911255 to 102911282 27 - TSS region transcription start site region 52145
Tssr52146 5 102913117 to 102913154 37 - TSS region transcription start site region 52146
Tssr52147 5 102913179 to 102913221 42 - TSS region transcription start site region 52147
Gm42522 5 102951818 to 102952072 254 - pseudogene predicted gene 42522
Tssr52148 5 102978480 to 102978483 3 - TSS region transcription start site region 52148
Gm43789 5 102983842 to 102986313 2471 - unclassified gene predicted gene 43789
D5Mit412 5 103014337 to 103014488 151 DNA segment DNA segment, Chr 5, Massachusetts Institute of Technology 412
Tssr52149 5 103026928 to 103026971 43 - TSS region transcription start site region 52149
Tssr52150 5 103100054 to 103100088 34 - TSS region transcription start site region 52150
2900063K03Rik 5 103202753 to 103203547 794 unclassified gene RIKEN cDNA 2900063K03 gene
Tssr52151 5 103211074 to 103211101 27 - TSS region transcription start site region 52151
Tssr52152 5 103211109 to 103211128 19 - TSS region transcription start site region 52152
Tssr52153 5 103211236 to 103211245 9 - TSS region transcription start site region 52153
Tssr52154 5 103211251 to 103211321 70 - TSS region transcription start site region 52154
4930429D17Rik 5 103230375 to 103299029 68654 - lincRNA gene RIKEN cDNA 4930429D17 gene
Gm18702 5 103273909 to 103274496 587 + pseudogene predicted gene, 18702
Tssr52155 5 103309703 to 103309739 36 - TSS region transcription start site region 52155