Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:59112268-59213156

15 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Shoc1	4	59041984 to 59113971	71987	-	protein coding gene	shortage in chiasmata 1
Tssr41923	4	59117833 to 59117843	10	-	TSS region	transcription start site region 41923
Gm35527	4	59117970 to 59135814	17844	+	lncRNA gene	predicted gene, 35527
Tssr1187	4	59134598 to 59134600	2	-	TSS region	transcription start site region 1187
Gm12594	4	59135068 to 59137454	2386	-	sense intronic lncRNA gene	predicted gene 12594
Rpsa-ps11	4	59162268 to 59163156	888	-	pseudogene	ribosomal protein SA, pseudogene 11
Cpgi14345	4	59188825 to 59190187	1362		CpG island	CpG island 14345
Tssr37412	4	59189202 to 59189213	11	+	TSS region	transcription start site region 37412
Tssr37413	4	59189240 to 59189254	14	+	TSS region	transcription start site region 37413
Ugcg	4	59189257 to 59222833	33576	+	protein coding gene	UDP-glucose ceramide glucosyltransferase
Tssr37414	4	59189440 to 59189555	115	+	TSS region	transcription start site region 37414
Tssr37415	4	59189561 to 59189586	25	+	TSS region	transcription start site region 37415
Tssr37416	4	59189639 to 59189646	7	+	TSS region	transcription start site region 37416
Tssr37417	4	59189666 to 59189677	11	+	TSS region	transcription start site region 37417
Tssr37418	4	59197560 to 59197564	4	+	TSS region	transcription start site region 37418