Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:48049544-48509613

Filter by:
41 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Nr4a3 4 48045153 to 48086447 41294 + protein coding gene nuclear receptor subfamily 4, group A, member 3
Tssr37209 4 48049926 to 48049966 40 + TSS region transcription start site region 37209
Tssr37210 4 48050777 to 48050781 4 + TSS region transcription start site region 37210
Tssr37211 4 48051254 to 48051268 14 + TSS region transcription start site region 37211
Tssr37212 4 48051277 to 48051297 20 + TSS region transcription start site region 37212
Tssr37213 4 48051367 to 48051372 5 + TSS region transcription start site region 37213
Tssr37214 4 48051379 to 48051396 17 + TSS region transcription start site region 37214
Tssr37215 4 48051430 to 48051444 14 + TSS region transcription start site region 37215
Cpgi14281 4 48051490 to 48052337 847 CpG island CpG island 14281
Tssr37216 4 48051523 to 48051535 12 + TSS region transcription start site region 37216
Tssr37217 4 48056566 to 48056573 7 + TSS region transcription start site region 37217
Tssr37218 4 48083599 to 48083603 4 + TSS region transcription start site region 37218
Tssr37219 4 48083679 to 48083683 4 + TSS region transcription start site region 37219
Tssr37220 4 48083806 to 48083821 15 + TSS region transcription start site region 37220
Tssr37221 4 48084222 to 48084242 20 + TSS region transcription start site region 37221
Tssr37222 4 48085458 to 48085468 10 + TSS region transcription start site region 37222
Tssr37223 4 48085522 to 48085533 11 + TSS region transcription start site region 37223
Tssr37224 4 48085551 to 48085556 5 + TSS region transcription start site region 37224
Cpgi14282 4 48124725 to 48125419 694 CpG island CpG island 14282
Tssr37225 4 48124903 to 48124938 35 + TSS region transcription start site region 37225
Stx17 4 48124915 to 48186507 61592 + protein coding gene syntaxin 17
Tssr37226 4 48124944 to 48124955 11 + TSS region transcription start site region 37226
Erp44 4 48193323 to 48279558 86235 - protein coding gene endoplasmic reticulum protein 44
Mir1958 4 48213119 to 48213215 96 - miRNA gene microRNA 1958
Cpgi14283 4 48279095 to 48280127 1032 CpG island CpG island 14283
Tssr41637 4 48279502 to 48279515 13 - TSS region transcription start site region 41637
Tssr41638 4 48279544 to 48279613 69 - TSS region transcription start site region 41638
Invs 4 48279760 to 48431954 152194 + protein coding gene inversin
Tssr37227 4 48279794 to 48279852 58 + TSS region transcription start site region 37227
Tssr1170 4 48279857 to 48279881 24 + TSS region transcription start site region 1170
Gm12435 4 48344215 to 48345230 1015 - pseudogene predicted gene 12435
C030004N09Rik 4 48427728 to 48429230 1502 unclassified gene RIKEN cDNA C030004N09 gene
Tex10 4 48430858 to 48473459 42601 - protein coding gene testis expressed gene 10
Tssr41639 4 48435004 to 48435017 13 - TSS region transcription start site region 41639
Tssr41640 4 48435099 to 48435108 9 - TSS region transcription start site region 41640
Tssr41641 4 48442128 to 48442131 3 - TSS region transcription start site region 41641
Tssr41642 4 48468791 to 48468819 28 - TSS region transcription start site region 41642
Cpgi14284 4 48472788 to 48473684 896 CpG island CpG island 14284
Tssr41643 4 48473339 to 48473356 17 - TSS region transcription start site region 41643
Tssr41644 4 48473382 to 48473401 19 - TSS region transcription start site region 41644
Tssr41645 4 48473403 to 48473457 54 - TSS region transcription start site region 41645