Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:43489428-43523747

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi14191 4 43492749 to 43493874 1125 CpG island CpG island 14191
Rmrp 4 43492785 to 43493059 274 - RNase MRP RNA gene RNA component of mitochondrial RNAase P
Tssr36969 4 43492823 to 43492841 18 + TSS region transcription start site region 36969
Tssr41424 4 43493051 to 43493065 14 - TSS region transcription start site region 41424
Ccdc107 4 43493340 to 43495921 2581 + protein coding gene coiled-coil domain containing 107
Tssr36970 4 43493345 to 43493430 85 + TSS region transcription start site region 36970
Arhgef39 4 43496142 to 43499695 3553 - protein coding gene Rho guanine nucleotide exchange factor (GEF) 39
Cpgi14192 4 43499232 to 43499929 697 CpG island CpG island 14192
Tssr41425 4 43499617 to 43499677 60 - TSS region transcription start site region 41425
Gm12454 4 43504428 to 43508747 4319 - antisense lncRNA gene predicted gene 12454
Tssr36971 4 43506338 to 43506360 22 + TSS region transcription start site region 36971
Tssr36972 4 43507018 to 43507034 16 + TSS region transcription start site region 36972
Car9 4 43507026 to 43513729 6703 + protein coding gene carbonic anhydrase 9
Tssr36973 4 43507040 to 43507051 11 + TSS region transcription start site region 36973
Tssr36974 4 43507085 to 43507096 11 + TSS region transcription start site region 36974
Cpgi14193 4 43508568 to 43508874 306 CpG island CpG island 14193
Tssr41426 4 43508714 to 43508734 20 - TSS region transcription start site region 41426
Tssr41427 4 43508740 to 43508753 13 - TSS region transcription start site region 41427
Tssr36975 4 43508850 to 43508899 49 + TSS region transcription start site region 36975
Tpm2 4 43514711 to 43523765 9054 - protein coding gene tropomyosin 2, beta
Tssr41428 4 43515168 to 43515190 22 - TSS region transcription start site region 41428
Tssr41429 4 43515302 to 43515321 19 - TSS region transcription start site region 41429
Tssr41430 4 43515701 to 43515765 64 - TSS region transcription start site region 41430
Tssr41431 4 43515787 to 43515801 14 - TSS region transcription start site region 41431
Tssr36976 4 43518410 to 43518441 31 + TSS region transcription start site region 36976
Tssr41432 4 43518438 to 43518455 17 - TSS region transcription start site region 41432
Tssr41433 4 43518459 to 43518473 14 - TSS region transcription start site region 41433
Tssr41434 4 43518685 to 43518704 19 - TSS region transcription start site region 41434
Tssr36977 4 43519236 to 43519257 21 + TSS region transcription start site region 36977
Tssr41435 4 43519255 to 43519299 44 - TSS region transcription start site region 41435
Tssr36978 4 43519408 to 43519474 66 + TSS region transcription start site region 36978
Tssr41436 4 43519661 to 43519718 57 - TSS region transcription start site region 41436
Tssr41437 4 43520045 to 43520059 14 - TSS region transcription start site region 41437
Tssr41438 4 43522727 to 43522750 23 - TSS region transcription start site region 41438
Tssr1155 4 43522849 to 43522903 54 - TSS region transcription start site region 1155
Cpgi14194 4 43523104 to 43524663 1559 CpG island CpG island 14194
Tssr41439 4 43523455 to 43523471 16 - TSS region transcription start site region 41439
Tssr41440 4 43523674 to 43523699 25 - TSS region transcription start site region 41440
Tssr41441 4 43523746 to 43523766 20 - TSS region transcription start site region 41441