Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:132589025-132774765

41 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tssr43690	4	132608297 to 132608313	16	-	TSS region	transcription start site region 43690
Tssr39405	4	132608517 to 132608531	14	+	TSS region	transcription start site region 39405
Tssr39406	4	132608543 to 132608561	18	+	TSS region	transcription start site region 39406
Tssr39407	4	132611161 to 132611166	5	+	TSS region	transcription start site region 39407
Tssr43691	4	132611391 to 132611408	17	-	TSS region	transcription start site region 43691
Tssr39408	4	132611588 to 132611608	20	+	TSS region	transcription start site region 39408
Tssr39409	4	132611618 to 132611636	18	+	TSS region	transcription start site region 39409
Tssr43692	4	132617889 to 132617938	49	-	TSS region	transcription start site region 43692
Tssr39410	4	132620004 to 132620045	41	+	TSS region	transcription start site region 39410
Tssr39411	4	132624323 to 132624330	7	+	TSS region	transcription start site region 39411
Cpgi14968	4	132638718 to 132639718	1000		CpG island	CpG island 14968
Tssr43693	4	132638885 to 132638904	19	-	TSS region	transcription start site region 43693
Eya3	4	132639014 to 132724765	85751	+	protein coding gene	EYA transcriptional coactivator and phosphatase 3
Tssr39412	4	132639028 to 132639118	90	+	TSS region	transcription start site region 39412
Tssr39413	4	132656683 to 132656705	22	+	TSS region	transcription start site region 39413
Tssr39414	4	132690656 to 132690664	8	+	TSS region	transcription start site region 39414
Tssr39415	4	132709938 to 132709969	31	+	TSS region	transcription start site region 39415
Tssr39416	4	132716252 to 132716254	2	+	TSS region	transcription start site region 39416
Xkr8	4	132724897 to 132732546	7649	-	protein coding gene	X-linked Kx blood group related 8
Tssr43694	4	132727627 to 132727640	13	-	TSS region	transcription start site region 43694
Tssr43695	4	132731710 to 132731721	11	-	TSS region	transcription start site region 43695
Tssr39417	4	132731826 to 132731843	17	+	TSS region	transcription start site region 39417
Cpgi14969	4	132732201 to 132732633	432		CpG island	CpG island 14969
Tssr43696	4	132732427 to 132732438	11	-	TSS region	transcription start site region 43696
Tssr43697	4	132732514 to 132732558	44	-	TSS region	transcription start site region 43697
Tssr43698	4	132732565 to 132732586	21	-	TSS region	transcription start site region 43698
Smpdl3b	4	132732966 to 132757171	24205	-	protein coding gene	sphingomyelin phosphodiesterase, acid-like 3B
Cpgi14970	4	132733457 to 132733786	329		CpG island	CpG island 14970
Tssr43699	4	132734825 to 132734836	11	-	TSS region	transcription start site region 43699
Tssr43700	4	132734837 to 132734856	19	-	TSS region	transcription start site region 43700
Tssr39418	4	132737625 to 132737629	4	+	TSS region	transcription start site region 39418
Tssr43701	4	132747254 to 132747257	3	-	TSS region	transcription start site region 43701
Cpgi14971	4	132756903 to 132757331	428		CpG island	CpG island 14971
Tssr43702	4	132757104 to 132757107	3	-	TSS region	transcription start site region 43702
Tssr43703	4	132757107 to 132757152	45	-	TSS region	transcription start site region 43703
Tssr43704	4	132757162 to 132757187	25	-	TSS region	transcription start site region 43704
Tssr43705	4	132757229 to 132757240	11	-	TSS region	transcription start site region 43705
Tssr43706	4	132757248 to 132757259	11	-	TSS region	transcription start site region 43706
Cpgi14972	4	132768007 to 132768976	969		CpG island	CpG island 14972
Tssr39419	4	132768325 to 132768390	65	+	TSS region	transcription start site region 39419
Rpa2	4	132768360 to 132778746	10386	+	protein coding gene	replication protein A2