Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:129987856-130107901

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31 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Adgrb2 4 129984870 to 130022633 37763 + protein coding gene adhesion G protein-coupled receptor B2
Cpgi14914 4 129987671 to 129988640 969 CpG island CpG island 14914
Cpgi14915 4 130006630 to 130006993 363 CpG island CpG island 14915
Tssr39216 4 130006735 to 130006754 19 + TSS region transcription start site region 39216
Cpgi14916 4 130007608 to 130007901 293 CpG island CpG island 14916
Gm12963 4 130024256 to 130047774 23518 - antisense lncRNA gene predicted gene 12963
Cpgi14917 4 130036853 to 130037239 386 CpG island CpG island 14917
Cpgi14918 4 130045721 to 130045997 276 CpG island CpG island 14918
Cpgi14919 4 130047323 to 130048102 779 CpG island CpG island 14919
Tssr39217 4 130047360 to 130047389 29 + TSS region transcription start site region 39217
Tssr1308 4 130047546 to 130047599 53 + TSS region transcription start site region 1308
Col16a1 4 130047840 to 130099283 51443 + protein coding gene collagen, type XVI, alpha 1
Tssr39218 4 130047856 to 130047901 45 + TSS region transcription start site region 39218
Tssr39219 4 130047914 to 130047929 15 + TSS region transcription start site region 39219
Tssr39220 4 130050710 to 130050734 24 + TSS region transcription start site region 39220
Tssr39221 4 130050741 to 130050749 8 + TSS region transcription start site region 39221
Tssr39222 4 130055023 to 130055047 24 + TSS region transcription start site region 39222
Tssr39223 4 130055090 to 130055101 11 + TSS region transcription start site region 39223
Tssr39224 4 130055279 to 130055284 5 + TSS region transcription start site region 39224
Tssr1309 4 130055351 to 130055379 28 + TSS region transcription start site region 1309
Tssr39225 4 130056173 to 130056218 45 + TSS region transcription start site region 39225
Tssr39226 4 130056766 to 130056776 10 + TSS region transcription start site region 39226
Tssr39227 4 130061144 to 130061164 20 + TSS region transcription start site region 39227
Tssr39228 4 130061166 to 130061186 20 + TSS region transcription start site region 39228
Gm46871 4 130076240 to 130079510 3270 - lncRNA gene predicted gene, 46871
Tssr39229 4 130104886 to 130104904 18 + TSS region transcription start site region 39229
Gm40258 4 130105455 to 130108282 2827 - lncRNA gene predicted gene, 40258
Cpgi14920 4 130107258 to 130108067 809 CpG island CpG island 14920
Pef1 4 130107556 to 130128134 20578 + protein coding gene penta-EF hand domain containing 1
Tssr39230 4 130107600 to 130107606 6 + TSS region transcription start site region 39230
Tssr39231 4 130107609 to 130107620 11 + TSS region transcription start site region 39231