MPD: Genes and genomic regions

Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g. 17:44-45 ..or.. X:22500000-23000000

Click here to work with the entire chromosomal region 4:129677180-129807189

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18 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Tmem39b	4	129676355 to 129696838	20483	-	protein coding gene	transmembrane protein 39b
Mir7016	4	129684500 to 129684571	71	-	miRNA gene	microRNA 7016
Tssr43555	4	129684735 to 129684745	10	-	TSS region	transcription start site region 43555
Cpgi14906	4	129696249 to 129697174	925		CpG island	CpG island 14906
Tssr43556	4	129696579 to 129696602	23	-	TSS region	transcription start site region 43556
Tssr43557	4	129696734 to 129696743	9	-	TSS region	transcription start site region 43557
Tssr43558	4	129696758 to 129696804	46	-	TSS region	transcription start site region 43558
Tssr43559	4	129696817 to 129696843	26	-	TSS region	transcription start site region 43559
Tssr43560	4	129696849 to 129696860	11	-	TSS region	transcription start site region 43560
Khdrbs1	4	129703164 to 129742303	39139	-	protein coding gene	KH domain containing, RNA binding, signal transduction associated 1
Cpgi14907	4	129741256 to 129742978	1722		CpG island	CpG island 14907
Tssr43561	4	129742180 to 129742189	9	-	TSS region	transcription start site region 43561
Tssr43562	4	129742233 to 129742268	35	-	TSS region	transcription start site region 43562
Tssr43563	4	129742275 to 129742312	37	-	TSS region	transcription start site region 43563
Gm12967	4	129761628 to 129761916	288	-	pseudogene	predicted gene 12967
Gm28017	4	129762311 to 129762436	125	-	miRNA gene	predicted gene, 28017
Tssr39181	4	129772545 to 129772566	21	+	TSS region	transcription start site region 39181
Tssr39182	4	129795715 to 129795747	32	+	TSS region	transcription start site region 39182