Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:126741939-127088135

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73 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Ncdn 4 126743750 to 126753438 9688 - protein coding gene neurochondrin
Tssr43390 4 126744110 to 126744121 11 - TSS region transcription start site region 43390
Tssr43391 4 126744122 to 126744137 15 - TSS region transcription start site region 43391
Tssr43392 4 126744230 to 126744244 14 - TSS region transcription start site region 43392
Cpgi14829 4 126744862 to 126745124 262 CpG island CpG island 14829
Cpgi14830 4 126749822 to 126750630 808 CpG island CpG island 14830
Tssr43393 4 126752015 to 126752022 7 - TSS region transcription start site region 43393
Tssr43394 4 126752077 to 126752109 32 - TSS region transcription start site region 43394
Tssr43395 4 126752111 to 126752118 7 - TSS region transcription start site region 43395
Tssr43396 4 126752590 to 126752602 12 - TSS region transcription start site region 43396
Cpgi14831 4 126752642 to 126754316 1674 CpG island CpG island 14831
Tssr43397 4 126752777 to 126752788 11 - TSS region transcription start site region 43397
Tssr43398 4 126752987 to 126753054 67 - TSS region transcription start site region 43398
Tssr1300 4 126753294 to 126753307 13 - TSS region transcription start site region 1300
Tssr43399 4 126753349 to 126753361 12 - TSS region transcription start site region 43399
Tssr43400 4 126753372 to 126753440 68 - TSS region transcription start site region 43400
AU040320 4 126753555 to 126869694 116139 + protein coding gene expressed sequence AU040320
Tssr43401 4 126753630 to 126753644 14 - TSS region transcription start site region 43401
Tssr43402 4 126753666 to 126753680 14 - TSS region transcription start site region 43402
Tssr43403 4 126753710 to 126753729 19 - TSS region transcription start site region 43403
Tssr43404 4 126753746 to 126753782 36 - TSS region transcription start site region 43404
Tssr39018 4 126753788 to 126753835 47 + TSS region transcription start site region 39018
Tssr39019 4 126753870 to 126753880 10 + TSS region transcription start site region 39019
Tssr39020 4 126756548 to 126756580 32 + TSS region transcription start site region 39020
Tssr39021 4 126756983 to 126757004 21 + TSS region transcription start site region 39021
Tssr39022 4 126757006 to 126757013 7 + TSS region transcription start site region 39022
Tssr39023 4 126764566 to 126764586 20 + TSS region transcription start site region 39023
Gm12937 4 126795473 to 126796415 942 - pseudogene predicted gene 12937
Tssr1301 4 126808584 to 126808588 4 + TSS region transcription start site region 1301
Gm24161 4 126818016 to 126818145 129 - snoRNA gene predicted gene, 24161
D4Mit73 4 126820691 to 126820839 148 DNA segment DNA segment, Chr 4, Massachusetts Institute of Technology 73
Tssr39024 4 126830661 to 126830665 4 + TSS region transcription start site region 39024
Tssr39025 4 126850393 to 126850404 11 + TSS region transcription start site region 39025
Gm25604 4 126860980 to 126861112 132 - snoRNA gene predicted gene, 25604
Zmym4 4 126861939 to 126968135 106196 - protein coding gene zinc finger, MYM-type 4
A730059M13Rik 4 126916975 to 126920029 3054 unclassified gene RIKEN cDNA A730059M13 gene
Cpgi14832 4 126967225 to 126968410 1185 CpG island CpG island 14832
Tssr43405 4 126967992 to 126967999 7 - TSS region transcription start site region 43405
Tssr43406 4 126968050 to 126968114 64 - TSS region transcription start site region 43406
Tssr43407 4 126968124 to 126968154 30 - TSS region transcription start site region 43407
4933424C08Rik 4 126968131 to 126969378 1247 unclassified gene RIKEN cDNA 4933424C08 gene
Tssr43408 4 126968159 to 126968177 18 - TSS region transcription start site region 43408
Tssr43409 4 126968180 to 126968198 18 - TSS region transcription start site region 43409
Tssr43410 4 126968200 to 126968236 36 - TSS region transcription start site region 43410
Tssr39026 4 126968427 to 126968436 9 + TSS region transcription start site region 39026
Tssr43411 4 126968843 to 126968853 10 - TSS region transcription start site region 43411
Gm12939 4 126983439 to 126983603 164 + pseudogene predicted gene 12939
Cpgi14833 4 127021198 to 127022549 1351 CpG island CpG island 14833
Tssr39027 4 127021285 to 127021292 7 + TSS region transcription start site region 39027
Tssr39028 4 127021294 to 127021299 5 + TSS region transcription start site region 39028
Tssr39029 4 127021311 to 127021339 28 + TSS region transcription start site region 39029
Sfpq 4 127021324 to 127037013 15689 + protein coding gene splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
Tssr39030 4 127021978 to 127021992 14 + TSS region transcription start site region 39030
Tssr39031 4 127023332 to 127023354 22 + TSS region transcription start site region 39031
Tssr39032 4 127023406 to 127023434 28 + TSS region transcription start site region 39032
Tssr39033 4 127023439 to 127023460 21 + TSS region transcription start site region 39033
Tssr39034 4 127023478 to 127023509 31 + TSS region transcription start site region 39034
Tssr39035 4 127023658 to 127023740 82 + TSS region transcription start site region 39035
Tssr39036 4 127025849 to 127025914 65 + TSS region transcription start site region 39036
Tssr39037 4 127029846 to 127029899 53 + TSS region transcription start site region 39037
Tssr39038 4 127030167 to 127030178 11 + TSS region transcription start site region 39038
Gm12940 4 127033731 to 127049398 15667 + unclassified non-coding RNA gene predicted gene 12940
Tssr39039 4 127035099 to 127035115 16 + TSS region transcription start site region 39039
Tssr39040 4 127035668 to 127035678 10 + TSS region transcription start site region 39040
Gm12941 4 127046383 to 127046602 219 + pseudogene predicted gene 12941
Zmym1 4 127047094 to 127061152 14058 - protein coding gene zinc finger, MYM domain containing 1
Gm12944 4 127056262 to 127056724 462 + pseudogene predicted gene 12944
Cpgi14834 4 127060878 to 127061275 397 CpG island CpG island 14834
Tssr43412 4 127061085 to 127061125 40 - TSS region transcription start site region 43412
Tssr43413 4 127061126 to 127061143 17 - TSS region transcription start site region 43413
Cpgi14835 4 127076976 to 127077660 684 CpG island CpG island 14835
Tssr39041 4 127077374 to 127077461 87 + TSS region transcription start site region 39041
Zmym6 4 127077383 to 127124372 46989 + protein coding gene zinc finger, MYM-type 6