Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 4:126114082-126252755

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39 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stk40 4 126103957 to 126141029 37072 + protein coding gene serine/threonine kinase 40
Tssr38979 4 126117154 to 126117158 4 + TSS region transcription start site region 38979
Tssr38980 4 126139345 to 126139362 17 + TSS region transcription start site region 38980
Tssr38981 4 126140829 to 126140850 21 + TSS region transcription start site region 38981
Gm12946 4 126145979 to 126147735 1756 + antisense lncRNA gene predicted gene 12946
Eva1b 4 126147744 to 126149875 2131 + protein coding gene eva-1 homolog B (C. elegans)
Cpgi14808 4 126148157 to 126149697 1540 CpG island CpG island 14808
Tssr38982 4 126148457 to 126148527 70 + TSS region transcription start site region 38982
Sh3d21 4 126150602 to 126163491 12889 - protein coding gene SH3 domain containing 21
Cpgi14809 4 126162219 to 126163441 1222 CpG island CpG island 14809
Tssr43348 4 126162619 to 126162637 18 - TSS region transcription start site region 43348
Tssr43349 4 126162644 to 126162655 11 - TSS region transcription start site region 43349
Tssr43350 4 126163275 to 126163296 21 - TSS region transcription start site region 43350
Tssr43351 4 126163307 to 126163332 25 - TSS region transcription start site region 43351
Tssr43352 4 126163470 to 126163486 16 - TSS region transcription start site region 43352
Thrap3 4 126164082 to 126202710 38628 - protein coding gene thyroid hormone receptor associated protein 3
Tssr43353 4 126168999 to 126169004 5 - TSS region transcription start site region 43353
Tssr43354 4 126195157 to 126195162 5 - TSS region transcription start site region 43354
Tssr43355 4 126198728 to 126198737 9 - TSS region transcription start site region 43355
Tssr43356 4 126201150 to 126201165 15 - TSS region transcription start site region 43356
Gm25323 4 126201175 to 126201277 102 - snRNA gene predicted gene, 25323
Cpgi14810 4 126202202 to 126203213 1011 CpG island CpG island 14810
Tssr43357 4 126202335 to 126202401 66 - TSS region transcription start site region 43357
Tssr43358 4 126202583 to 126202698 115 - TSS region transcription start site region 43358
Tssr43359 4 126202757 to 126202762 5 - TSS region transcription start site region 43359
D730050C22Rik 4 126202877 to 126203923 1046 unclassified gene RIKEN cDNA D730050C22 gene
Tssr38983 4 126202995 to 126203012 17 + TSS region transcription start site region 38983
Tssr38984 4 126227622 to 126227650 28 + TSS region transcription start site region 38984
Map7d1 4 126232167 to 126256343 24176 - protein coding gene MAP7 domain containing 1
Tssr43360 4 126236584 to 126236632 48 - TSS region transcription start site region 43360
Cpgi14811 4 126236604 to 126237416 812 CpG island CpG island 14811
Tssr43361 4 126237805 to 126237845 40 - TSS region transcription start site region 43361
Tssr43362 4 126242056 to 126242077 21 - TSS region transcription start site region 43362
Tssr43363 4 126242081 to 126242096 15 - TSS region transcription start site region 43363
Tssr43364 4 126242115 to 126242126 11 - TSS region transcription start site region 43364
Tssr43365 4 126242178 to 126242193 15 - TSS region transcription start site region 43365
Tssr43366 4 126242258 to 126242286 28 - TSS region transcription start site region 43366
Tssr43367 4 126242292 to 126242330 38 - TSS region transcription start site region 43367
Tssr43368 4 126249497 to 126249502 5 - TSS region transcription start site region 43368