Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:95949832-96108466

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi13530 3 95950700 to 95951490 790 CpG island CpG island 13530
Tssr34570 3 95951017 to 95951036 19 - TSS region transcription start site region 34570
Tssr30663 3 95951058 to 95951086 28 + TSS region transcription start site region 30663
Tssr30664 3 95951307 to 95951367 60 + TSS region transcription start site region 30664
Gm20940 3 95964029 to 95964388 359 - pseudogene predicted gene, 20940
Tssr30665 3 95972457 to 95972479 22 + TSS region transcription start site region 30665
Cpgi13531 3 95973250 to 95973402 152 CpG island CpG island 13531
Tssr34571 3 95977117 to 95977167 50 - TSS region transcription start site region 34571
Tssr30666 3 95977410 to 95977442 32 + TSS region transcription start site region 30666
Tssr30667 3 95982385 to 95982402 17 + TSS region transcription start site region 30667
Tssr30668 3 95982408 to 95982438 30 + TSS region transcription start site region 30668
Tssr30669 3 95982809 to 95982815 6 + TSS region transcription start site region 30669
Gm4097 3 95982810 to 95983604 794 + pseudogene predicted gene 4097
Tssr30670 3 95985490 to 95985523 33 + TSS region transcription start site region 30670
Gm9054 3 95985510 to 95986967 1457 + lncRNA gene predicted gene 9054
Cpgi13532 3 95986384 to 95986577 193 CpG island CpG island 13532
Plekho1 3 95988809 to 95995863 7054 - protein coding gene pleckstrin homology domain containing, family O member 1
Tssr34572 3 95989294 to 95989306 12 - TSS region transcription start site region 34572
Tssr30671 3 95989348 to 95989371 23 + TSS region transcription start site region 30671
Tssr34573 3 95989396 to 95989414 18 - TSS region transcription start site region 34573
Tssr34574 3 95990846 to 95990857 11 - TSS region transcription start site region 34574
Tssr34575 3 95990863 to 95990894 31 - TSS region transcription start site region 34575
Tssr34576 3 95993653 to 95993678 25 - TSS region transcription start site region 34576
Tssr34577 3 95993702 to 95993719 17 - TSS region transcription start site region 34577
Tssr30672 3 95994031 to 95994042 11 + TSS region transcription start site region 30672
Tssr30673 3 95994096 to 95994122 26 + TSS region transcription start site region 30673
Cpgi13533 3 95995138 to 95996509 1371 CpG island CpG island 13533
Tssr34578 3 95995640 to 95995659 19 - TSS region transcription start site region 34578
Tssr34579 3 95995662 to 95995692 30 - TSS region transcription start site region 34579
Tssr34580 3 95995698 to 95995722 24 - TSS region transcription start site region 34580
Tssr34581 3 95995791 to 95995802 11 - TSS region transcription start site region 34581
Tssr34582 3 95995810 to 95995821 11 - TSS region transcription start site region 34582
Tssr34583 3 95995835 to 95995857 22 - TSS region transcription start site region 34583
Gm9052 3 95995918 to 95996536 618 unclassified gene predicted gene 9052
Tssr34584 3 95995936 to 95995955 19 - TSS region transcription start site region 34584
Tssr30674 3 95995985 to 95996004 19 + TSS region transcription start site region 30674
Tssr34585 3 95995999 to 95996010 11 - TSS region transcription start site region 34585
Tssr30675 3 95996106 to 95996126 20 + TSS region transcription start site region 30675
Tssr30676 3 95996145 to 95996160 15 + TSS region transcription start site region 30676
Tssr34586 3 95997312 to 95997333 21 - TSS region transcription start site region 34586
Vps45 3 95999832 to 96058455 58623 - protein coding gene vacuolar protein sorting 45
Tssr34587 3 96016863 to 96016873 10 - TSS region transcription start site region 34587
Tssr34588 3 96034245 to 96034252 7 - TSS region transcription start site region 34588
D3Umi26 3 96042884 to 96043289 405 DNA segment DNA segment, Chr 3, University of Michigan 26
Cpgi13534 3 96057754 to 96058192 438 CpG island CpG island 13534
Tssr34589 3 96057823 to 96057874 51 - TSS region transcription start site region 34589
Tssr34590 3 96058446 to 96058459 13 - TSS region transcription start site region 34590
Tssr30677 3 96086690 to 96086735 45 + TSS region transcription start site region 30677
Gm43554 3 96086871 to 96087056 185 + pseudogene predicted gene 43554
Tssr34591 3 96094297 to 96094332 35 - TSS region transcription start site region 34591
Gm30044 3 96098167 to 96104358 6191 - lncRNA gene predicted gene, 30044
Cpgi13535 3 96104178 to 96105107 929 CpG island CpG island 13535
Tssr30678 3 96104478 to 96104489 11 + TSS region transcription start site region 30678
Tssr30679 3 96104498 to 96104571 73 + TSS region transcription start site region 30679
Otud7b 3 96104527 to 96161129 56602 + protein coding gene OTU domain containing 7B
Tssr30680 3 96104816 to 96104827 11 + TSS region transcription start site region 30680