Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:95469256-95539362

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37 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Arnt 3 95434388 to 95497240 62852 + protein coding gene aryl hydrocarbon receptor nuclear translocator
D3Umi11 3 95479715 to 95479844 129 DNA segment DNA segment, Chr 3, University of Michigan 11
Tssr30553 3 95481233 to 95481254 21 + TSS region transcription start site region 30553
Tssr30554 3 95496733 to 95496735 2 + TSS region transcription start site region 30554
Tssr30555 3 95499217 to 95499220 3 + TSS region transcription start site region 30555
Tssr30556 3 95499223 to 95499229 6 + TSS region transcription start site region 30556
Tssr30557 3 95499256 to 95499265 9 + TSS region transcription start site region 30557
Ctsk 3 95499256 to 95509362 10106 + protein coding gene cathepsin K
Tssr30558 3 95499273 to 95499289 16 + TSS region transcription start site region 30558
Tssr30559 3 95499792 to 95499811 19 + TSS region transcription start site region 30559
Tssr30560 3 95499856 to 95499868 12 + TSS region transcription start site region 30560
Tssr30561 3 95499891 to 95499896 5 + TSS region transcription start site region 30561
Tssr30562 3 95502523 to 95502551 28 + TSS region transcription start site region 30562
Tssr34481 3 95511735 to 95511740 5 - TSS region transcription start site region 34481
Tssr34482 3 95511856 to 95511870 14 - TSS region transcription start site region 34482
Tssr34483 3 95518977 to 95518991 14 - TSS region transcription start site region 34483
Tssr34484 3 95519036 to 95519056 20 - TSS region transcription start site region 34484
Tssr34485 3 95521138 to 95521163 25 - TSS region transcription start site region 34485
Gm40096 3 95523211 to 95524499 1288 - lncRNA gene predicted gene, 40096
Tssr34486 3 95524815 to 95524839 24 - TSS region transcription start site region 34486
Tssr34487 3 95524879 to 95524895 16 - TSS region transcription start site region 34487
Tssr30563 3 95526777 to 95526797 20 + TSS region transcription start site region 30563
Ctss 3 95526786 to 95556403 29617 + protein coding gene cathepsin S
Tssr30564 3 95526800 to 95526811 11 + TSS region transcription start site region 30564
Tssr30565 3 95526819 to 95526871 52 + TSS region transcription start site region 30565
Tssr30566 3 95526878 to 95526889 11 + TSS region transcription start site region 30566
Tssr30567 3 95529428 to 95529536 108 + TSS region transcription start site region 30567
Tssr34488 3 95529520 to 95529570 50 - TSS region transcription start site region 34488
Tssr30568 3 95530181 to 95530200 19 + TSS region transcription start site region 30568
Hmgb1-ps5 3 95530418 to 95530974 556 + pseudogene high mobility group box 1, pseudogene 5
Tssr30569 3 95531917 to 95531925 8 + TSS region transcription start site region 30569
Tssr30570 3 95536902 to 95536920 18 + TSS region transcription start site region 30570
Tssr30571 3 95538708 to 95538738 30 + TSS region transcription start site region 30571
Tssr34489 3 95538740 to 95538768 28 - TSS region transcription start site region 34489
Tssr30572 3 95538747 to 95538816 69 + TSS region transcription start site region 30572
Tssr34490 3 95538812 to 95538848 36 - TSS region transcription start site region 34490
Tssr34491 3 95539205 to 95539225 20 - TSS region transcription start site region 34491