Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:92752008-93172116

51 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Lce1g	3	92750151 to 92752338	2187	-	protein coding gene	late cornified envelope 1G
Tssr34331	3	92752337 to 92752338	1	-	TSS region	transcription start site region 34331
Lce1h	3	92763215 to 92765065	1850	-	protein coding gene	late cornified envelope 1H
Tssr34332	3	92765060 to 92765066	6	-	TSS region	transcription start site region 34332
Lce1i	3	92777210 to 92778899	1689	-	protein coding gene	late cornified envelope 1I
Tssr34333	3	92778895 to 92778903	8	-	TSS region	transcription start site region 34333
Lce1j	3	92788844 to 92790514	1670	-	protein coding gene	late cornified envelope 1J
Lce1k	3	92806291 to 92807891	1600	-	protein coding gene	late cornified envelope 1K
Tssr34334	3	92807891 to 92807904	13	-	TSS region	transcription start site region 34334
Tssr957	3	92813516 to 92813521	5	-	TSS region	transcription start site region 957
Kprp	3	92823074 to 92827247	4173	-	protein coding gene	keratinocyte expressed, proline-rich
Cpgi13472	3	92823940 to 92824378	438		CpG island	CpG island 13472
Tssr34335	3	92825035 to 92825046	11	-	TSS region	transcription start site region 34335
Tssr34336	3	92827239 to 92827257	18	-	TSS region	transcription start site region 34336
Gm38201	3	92843297 to 92843683	386	-	lincRNA gene	predicted gene, 38201
Lce1l	3	92849949 to 92851286	1337	-	protein coding gene	late cornified envelope 1L
Tssr34337	3	92851284 to 92851286	2	-	TSS region	transcription start site region 34337
2310050C09Rik	3	92868359 to 92870205	1846	-	protein coding gene	RIKEN cDNA 2310050C09 gene
Tssr34338	3	92868995 to 92869007	12	-	TSS region	transcription start site region 34338
Tssr34339	3	92870215 to 92870224	9	-	TSS region	transcription start site region 34339
Lce3a	3	92925287 to 92926230	943	-	protein coding gene	late cornified envelope 3A
Tssr34340	3	92926242 to 92926247	5	-	TSS region	transcription start site region 34340
Tssr30313	3	92932975 to 92932983	8	+	TSS region	transcription start site region 30313
Lce3b	3	92932979 to 92934096	1117	+	protein coding gene	late cornified envelope 3B
Gm38078	3	92937681 to 92938072	391	+	pseudogene	predicted gene, 38078
Tssr30314	3	92944483 to 92944487	4	+	TSS region	transcription start site region 30314
Lce3c	3	92944486 to 92945730	1244	+	protein coding gene	late cornified envelope 3C
Gm24481	3	92949158 to 92949259	101	-	snRNA gene	predicted gene, 24481
Tssr30315	3	92957386 to 92957389	3	+	TSS region	transcription start site region 30315
Lce3d	3	92957390 to 92958505	1115	+	protein coding gene	late cornified envelope 3D
Gm22577	3	92962008 to 92962116	108	-	snRNA gene	predicted gene, 22577
Tssr30316	3	92967059 to 92967062	3	+	TSS region	transcription start site region 30316
Lce3e	3	92967061 to 92968281	1220	+	protein coding gene	late cornified envelope 3E
Tssr30317	3	92992213 to 92992221	8	+	TSS region	transcription start site region 30317
Lce3f	3	92992226 to 92993426	1200	+	protein coding gene	late cornified envelope 3F
Crct1	3	93014205 to 93015686	1481	-	protein coding gene	cysteine-rich C-terminal 1
Cpgi13473	3	93014470 to 93014796	326		CpG island	CpG island 13473
Tssr34341	3	93015679 to 93015694	15	-	TSS region	transcription start site region 34341
D3Mit311	3	93017195 to 93017313	118		DNA segment	DNA Segment, Chr 3, Massachusetts Institute of Technology 311
Lce1m	3	93017810 to 93019060	1250	-	protein coding gene	late cornified envelope 1M
Cpgi13474	3	93018148 to 93018472	324		CpG island	CpG island 13474
Tssr34342	3	93019057 to 93019060	3	-	TSS region	transcription start site region 34342
Gm38040	3	93064740 to 93064964	224	-	pseudogene	predicted gene, 38040
Gm4858	3	93068823 to 93075505	6682	+	protein coding gene	predicted gene 4858
Gm35785	3	93097581 to 93128245	30664	-	lncRNA gene	predicted gene, 35785
Gm37361	3	93100466 to 93100597	131	-	pseudogene	predicted gene, 37361
Tssr34343	3	93100670 to 93100674	4	-	TSS region	transcription start site region 34343
Tssr30318	3	93144782 to 93144798	16	+	TSS region	transcription start site region 30318
Crnn	3	93144787 to 93149471	4684	+	protein coding gene	cornulin
D3Umi1	3	93148199 to 93148605	406		DNA segment	DNA segment, Chr 3, University of Michigan 1
Gm37501	3	93152178 to 93152868	690	+	pseudogene	predicted gene, 37501