Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:89330219-89385253

30 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm34118	3	89325903 to 89331168	5265	-	lncRNA gene	predicted gene, 34118
Efna4	3	89333393 to 89338028	4635	-	protein coding gene	ephrin A4
Cpgi13423	3	89337570 to 89338221	651		CpG island	CpG island 13423
4731419I09Rik	3	89337850 to 89347831	9981	+	antisense lncRNA gene	RIKEN cDNA 4731419I09 gene
Tssr34115	3	89337963 to 89337979	16	-	TSS region	transcription start site region 34115
Tssr34116	3	89338005 to 89338066	61	-	TSS region	transcription start site region 34116
Tssr30091	3	89339640 to 89339649	9	+	TSS region	transcription start site region 30091
Adam15	3	89339640 to 89350028	10388	-	protein coding gene	a disintegrin and metallopeptidase domain 15 (metargidin)
Tssr34117	3	89340140 to 89340185	45	-	TSS region	transcription start site region 34117
Tssr34118	3	89340435 to 89340477	42	-	TSS region	transcription start site region 34118
Tssr34119	3	89342315 to 89342365	50	-	TSS region	transcription start site region 34119
Cpgi13424	3	89349110 to 89350739	1629		CpG island	CpG island 13424
Tssr34120	3	89349939 to 89349959	20	-	TSS region	transcription start site region 34120
Tssr34121	3	89349968 to 89350001	33	-	TSS region	transcription start site region 34121
Dcst1	3	89350219 to 89365253	15034	-	protein coding gene	DC-STAMP domain containing 1
Gm10702	3	89353629 to 89354898	1269	+	pseudogene	predicted gene 10702
Tssr34122	3	89355559 to 89355584	25	-	TSS region	transcription start site region 34122
Dcst2	3	89361975 to 89377549	15574	+	protein coding gene	DC-STAMP domain containing 2
Tssr34123	3	89365191 to 89365194	3	-	TSS region	transcription start site region 34123
Tssr34124	3	89365233 to 89365244	11	-	TSS region	transcription start site region 34124
Tssr30092	3	89365305 to 89365355	50	+	TSS region	transcription start site region 30092
Tssr30093	3	89366277 to 89366292	15	+	TSS region	transcription start site region 30093
Tssr30094	3	89367512 to 89367591	79	+	TSS region	transcription start site region 30094
Tssr30095	3	89367616 to 89367622	6	+	TSS region	transcription start site region 30095
Zbtb7b	3	89377644 to 89394776	17132	-	protein coding gene	zinc finger and BTB domain containing 7B
Cpgi13425	3	89378446 to 89378772	326		CpG island	CpG island 13425
Cpgi13426	3	89379709 to 89379935	226		CpG island	CpG island 13426
Tssr34125	3	89382929 to 89382937	8	-	TSS region	transcription start site region 34125
Tssr34126	3	89382947 to 89382960	13	-	TSS region	transcription start site region 34126
Tssr34127	3	89382982 to 89382990	8	-	TSS region	transcription start site region 34127