Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:89293899-89342965

26 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Gm33845	3	89290540 to 89302899	12359	-	lncRNA gene	predicted gene, 33845
Tssr30088	3	89293894 to 89293905	11	+	TSS region	transcription start site region 30088
Cpgi13418	3	89299707 to 89299992	285		CpG island	CpG island 13418
Gm22642	3	89302478 to 89302729	251	+	unclassified non-coding RNA gene	predicted gene, 22642
Tssr30089	3	89302862 to 89302879	17	+	TSS region	transcription start site region 30089
Tssr30090	3	89302887 to 89302898	11	+	TSS region	transcription start site region 30090
Gm34014	3	89303238 to 89314225	10987	+	lncRNA gene	predicted gene, 34014
Cpgi13419	3	89308365 to 89308541	176		CpG island	CpG island 13419
Efna3	3	89313899 to 89322960	9061	-	protein coding gene	ephrin A3
Gm15998	3	89315439 to 89318907	3468	+	antisense lncRNA gene	predicted gene 15998
Cpgi13420	3	89315442 to 89316095	653		CpG island	CpG island 13420
Cpgi13421	3	89316432 to 89316834	402		CpG island	CpG island 13421
Cpgi13422	3	89319113 to 89323690	4577		CpG island	CpG island 13422
Tssr34113	3	89322860 to 89322872	12	-	TSS region	transcription start site region 34113
Tssr34114	3	89322883 to 89322946	63	-	TSS region	transcription start site region 34114
Gm34118	3	89325903 to 89331168	5265	-	lncRNA gene	predicted gene, 34118
Efna4	3	89333393 to 89338028	4635	-	protein coding gene	ephrin A4
Cpgi13423	3	89337570 to 89338221	651		CpG island	CpG island 13423
4731419I09Rik	3	89337850 to 89347831	9981	+	antisense lncRNA gene	RIKEN cDNA 4731419I09 gene
Tssr34115	3	89337963 to 89337979	16	-	TSS region	transcription start site region 34115
Tssr34116	3	89338005 to 89338066	61	-	TSS region	transcription start site region 34116
Adam15	3	89339640 to 89350028	10388	-	protein coding gene	a disintegrin and metallopeptidase domain 15 (metargidin)
Tssr30091	3	89339640 to 89339649	9	+	TSS region	transcription start site region 30091
Tssr34117	3	89340140 to 89340185	45	-	TSS region	transcription start site region 34117
Tssr34118	3	89340435 to 89340477	42	-	TSS region	transcription start site region 34118
Tssr34119	3	89342315 to 89342365	50	-	TSS region	transcription start site region 34119