Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:31102858-31410378

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cfq8 3 24714068 to 31277954 6563886 QTL conditioned fear QTL 8
Skil 3 31095058 to 31122577 27519 + protein coding gene SKI-like
Tssr28718 3 31120030 to 31120051 21 + TSS region transcription start site region 28718
Tssr28719 3 31120450 to 31120463 13 + TSS region transcription start site region 28719
Tssr28720 3 31121404 to 31121423 19 + TSS region transcription start site region 28720
Tssr28721 3 31121697 to 31121701 4 + TSS region transcription start site region 28721
Tssr852 3 31126521 to 31126528 7 + TSS region transcription start site region 852
Cpgi13049 3 31149680 to 31150359 679 CpG island CpG island 13049
Tssr28722 3 31149750 to 31149765 15 + TSS region transcription start site region 28722
Tssr28723 3 31149771 to 31149787 16 + TSS region transcription start site region 28723
Cldn11 3 31149920 to 31164324 14404 + protein coding gene claudin 11
Tssr28724 3 31149934 to 31149958 24 + TSS region transcription start site region 28724
Tssr28725 3 31149964 to 31149979 15 + TSS region transcription start site region 28725
Cpgi13050 3 31158749 to 31158909 160 CpG island CpG island 13050
Cpgi13051 3 31163020 to 31163299 279 CpG island CpG island 13051
Tssr28726 3 31163138 to 31163151 13 + TSS region transcription start site region 28726
Tssr28727 3 31163352 to 31163363 11 + TSS region transcription start site region 28727
Tssr28728 3 31163377 to 31163388 11 + TSS region transcription start site region 28728
Tssr28729 3 31163876 to 31163890 14 + TSS region transcription start site region 28729
Slc7a14 3 31202858 to 31310378 107520 - protein coding gene solute carrier family 7 (cationic amino acid transporter, y+ system), member 14
Tssr32912 3 31208066 to 31208076 10 - TSS region transcription start site region 32912
Cpgi13052 3 31209195 to 31209348 153 CpG island CpG island 13052
Tssr28730 3 31220057 to 31220070 13 + TSS region transcription start site region 28730
Tssr32913 3 31225211 to 31225213 2 - TSS region transcription start site region 32913
Tssr28731 3 31228479 to 31228481 2 + TSS region transcription start site region 28731
Gm33834 3 31232620 to 31237362 4742 + lncRNA gene predicted gene, 33834
D3Mit151 3 31238343 to 31238491 148 DNA segment DNA segment, Chr 3, Massachusetts Institute of Technology 151
D3Dcr3 3 31247299 to 31247394 95 DNA segment DNA Segment, Chr 3, Derry C. Roopenian 3
Gm15496 3 31285587 to 31316891 31304 + antisense lncRNA gene predicted gene 15496
Cpgi13053 3 31309144 to 31310392 1248 CpG island CpG island 13053
Tssr32914 3 31310218 to 31310231 13 - TSS region transcription start site region 32914
Tssr32915 3 31310246 to 31310265 19 - TSS region transcription start site region 32915
Tssr32916 3 31310267 to 31310324 57 - TSS region transcription start site region 32916
Tssr32917 3 31310349 to 31310373 24 - TSS region transcription start site region 32917
Tssr32918 3 31330937 to 31330940 3 - TSS region transcription start site region 32918
Gm38025 3 31341012 to 31345280 4268 + lincRNA gene predicted gene, 38025