Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:30742876-30871263

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29 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr28685 3 30746210 to 30746235 25 + TSS region transcription start site region 28685
Samd7 3 30746293 to 30767174 20881 + protein coding gene sterile alpha motif domain containing 7
Tssr28686 3 30746325 to 30746341 16 + TSS region transcription start site region 28686
Gm33590 3 30752309 to 30756654 4345 - lncRNA gene predicted gene, 33590
Tssr28687 3 30791900 to 30791903 3 + TSS region transcription start site region 28687
4933429H19Rik 3 30792570 to 30793564 994 - antisense lncRNA gene RIKEN cDNA 4933429H19 gene
Cpgi13043 3 30792754 to 30794089 1335 CpG island CpG island 13043
Sec62 3 30792875 to 30821263 28388 + protein coding gene SEC62 homolog (S. cerevisiae)
Tssr28688 3 30793033 to 30793067 34 + TSS region transcription start site region 28688
Tssr28689 3 30793081 to 30793098 17 + TSS region transcription start site region 28689
Tssr28690 3 30793128 to 30793147 19 + TSS region transcription start site region 28690
Tssr32904 3 30793205 to 30793232 27 - TSS region transcription start site region 32904
Tssr28691 3 30793301 to 30793353 52 + TSS region transcription start site region 28691
Tssr32905 3 30793549 to 30793595 46 - TSS region transcription start site region 32905
Tssr28692 3 30801093 to 30801105 12 + TSS region transcription start site region 28692
Tssr28693 3 30801111 to 30801128 17 + TSS region transcription start site region 28693
Tssr28694 3 30809817 to 30809860 43 + TSS region transcription start site region 28694
D3Dcr1 3 30811631 to 30811726 95 DNA segment DNA Segment, Chr 3, Derry C. Roopenian 1
Gm38080 3 30828565 to 30828832 267 - pseudogene predicted gene, 38080
Gm42198 3 30841537 to 30851993 10456 - lncRNA gene predicted gene, 42198
Gm42199 3 30852483 to 30855860 3377 - lncRNA gene predicted gene, 42199
Cpgi13044 3 30855572 to 30856561 989 CpG island CpG island 13044
Tssr28695 3 30855730 to 30855758 28 + TSS region transcription start site region 28695
Tssr28696 3 30855946 to 30856002 56 + TSS region transcription start site region 28696
Gpr160 3 30855950 to 30897192 41242 + protein coding gene G protein-coupled receptor 160
Tssr28697 3 30856004 to 30856007 3 + TSS region transcription start site region 28697
Tssr28698 3 30856014 to 30856026 12 + TSS region transcription start site region 28698
Tssr28699 3 30864269 to 30864310 41 + TSS region transcription start site region 28699
Tssr28700 3 30864313 to 30864324 11 + TSS region transcription start site region 28700