Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:27556233-27866248

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20 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Fndc3b 3 27416162 to 27711307 295145 - protein coding gene fibronectin type III domain containing 3B
Tssr28631 3 27557396 to 27557410 14 + TSS region transcription start site region 28631
Mir3092 3 27584900 to 27584995 95 - miRNA gene microRNA 3092
Tssr32851 3 27605702 to 27605717 15 - TSS region transcription start site region 32851
Tssr28632 3 27617334 to 27617368 34 + TSS region transcription start site region 28632
D3Mit366 3 27656036 to 27656303 267 DNA segment DNA Segment, Chr 3, Massachusetts Institute of Technology-366
Tssr32852 3 27656866 to 27656878 12 - TSS region transcription start site region 32852
Tssr28633 3 27689675 to 27689680 5 + TSS region transcription start site region 28633
Tssr32853 3 27691545 to 27691556 11 - TSS region transcription start site region 32853
Tssr32854 3 27691607 to 27691633 26 - TSS region transcription start site region 32854
Tssr32855 3 27695861 to 27695894 33 - TSS region transcription start site region 32855
Cpgi13022 3 27709799 to 27711553 1754 CpG island CpG island 13022
Tssr32856 3 27710373 to 27710388 15 - TSS region transcription start site region 32856
Tssr32857 3 27710413 to 27710467 54 - TSS region transcription start site region 32857
Tssr32858 3 27711233 to 27711248 15 - TSS region transcription start site region 32858
Tssr32859 3 27711255 to 27711338 83 - TSS region transcription start site region 32859
Gm42194 3 27777858 to 27840919 63061 + lncRNA gene predicted gene, 42194
Gm32795 3 27797877 to 27815382 17505 - lncRNA gene predicted gene, 32795
Tssr32860 3 27863456 to 27863471 15 - TSS region transcription start site region 32860
Tmem212 3 27866066 to 27896368 30302 - protein coding gene transmembrane protein 212