Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.



Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 3:129816727-129895332

26 genes found.

Gene symbol	Chromo- some	Coordinates (bp, mm10)	Size (bp)	Strand	Feature Type	Gene name
Rrh	3	129808575 to 129822505	13930	-	protein coding gene	retinal pigment epithelium derived rhodopsin homolog
Tssr35631	3	129822425 to 129822432	7	-	TSS region	transcription start site region 35631
Tssr35632	3	129822471 to 129822482	11	-	TSS region	transcription start site region 35632
Tssr35633	3	129822487 to 129822510	23	-	TSS region	transcription start site region 35633
Tssr35634	3	129822517 to 129822530	13	-	TSS region	transcription start site region 35634
Tssr35635	3	129822534 to 129822545	11	-	TSS region	transcription start site region 35635
Gar1	3	129824912 to 129831396	6484	-	protein coding gene	GAR1 ribonucleoprotein
Cpgi13816	3	129830427 to 129831790	1363		CpG island	CpG island 13816
Tssr35636	3	129831123 to 129831186	63	-	TSS region	transcription start site region 35636
Tssr35637	3	129831289 to 129831341	52	-	TSS region	transcription start site region 35637
Tssr35638	3	129831374 to 129831406	32	-	TSS region	transcription start site region 35638
Tssr31654	3	129836633 to 129836672	39	+	TSS region	transcription start site region 31654
Cfi	3	129836727 to 129875328	38601	+	protein coding gene	complement component factor i
Tssr31655	3	129836729 to 129836747	18	+	TSS region	transcription start site region 31655
Tssr31656	3	129836774 to 129836804	30	+	TSS region	transcription start site region 31656
Gm36180	3	129844236 to 129847227	2991	-	lncRNA gene	predicted gene, 36180
Tssr35639	3	129847014 to 129847063	49	-	TSS region	transcription start site region 35639
Tssr31657	3	129852889 to 129852893	4	+	TSS region	transcription start site region 31657
Cpgi13817	3	129878123 to 129879463	1340		CpG island	CpG island 13817
Tssr31658	3	129878571 to 129878704	133	+	TSS region	transcription start site region 31658
Pla2g12a	3	129878606 to 129895825	17219	+	protein coding gene	phospholipase A2, group XIIA
Tssr31659	3	129878789 to 129878812	23	+	TSS region	transcription start site region 31659
Tssr31660	3	129881149 to 129881188	39	+	TSS region	transcription start site region 31660
D3Mit1006	3	129889794 to 129889913	119		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 1006
D3Mit1004	3	129889876 to 129890000	124		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 1004
D3Mit1005	3	129889983 to 129890124	141		DNA segment	DNA segment, Chr 3, Massachusetts Institute of Technology 1005