Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000


Click here to work with the entire chromosomal region 2:90884627-90914721

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33 genes found.
Gene symbol Chromo-
some
Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Tssr18781 2 90885421 to 90885426 5 + TSS region transcription start site region 18781
Tssr18782 2 90885450 to 90885459 9 + TSS region transcription start site region 18782
Tssr18783 2 90885475 to 90885501 26 + TSS region transcription start site region 18783
Tssr18784 2 90885503 to 90885523 20 + TSS region transcription start site region 18784
Tssr18785 2 90885527 to 90885561 34 + TSS region transcription start site region 18785
Cpgi11887 2 90885552 to 90886078 526 CpG island CpG island 11887
Tssr18786 2 90885764 to 90885771 7 + TSS region transcription start site region 18786
Tssr18787 2 90885788 to 90885849 61 + TSS region transcription start site region 18787
C1qtnf4 2 90885860 to 90890525 4665 + protein coding gene C1q and tumor necrosis factor related protein 4
Tssr18788 2 90885861 to 90885872 11 + TSS region transcription start site region 18788
Tssr18789 2 90885876 to 90885902 26 + TSS region transcription start site region 18789
Tssr18790 2 90885904 to 90885914 10 + TSS region transcription start site region 18790
Tssr18791 2 90885924 to 90885939 15 + TSS region transcription start site region 18791
Cpgi11888 2 90889192 to 90890656 1464 CpG island CpG island 11888
Tssr18792 2 90889893 to 90889904 11 + TSS region transcription start site region 18792
Tssr18793 2 90889906 to 90889954 48 + TSS region transcription start site region 18793
Tssr18794 2 90889962 to 90889994 32 + TSS region transcription start site region 18794
Tssr18795 2 90889995 to 90890011 16 + TSS region transcription start site region 18795
Tssr18796 2 90890250 to 90890263 13 + TSS region transcription start site region 18796
Gm32514 2 90891773 to 90893198 1425 - pseudogene predicted gene, 32514
Ndufs3 2 90894627 to 90904721 10094 - protein coding gene NADH:ubiquinone oxidoreductase core subunit S3
Tssr25138 2 90895341 to 90895344 3 - TSS region transcription start site region 25138
Cpgi11889 2 90904212 to 90905036 824 CpG island CpG island 11889
Tssr25139 2 90904649 to 90904727 78 - TSS region transcription start site region 25139
Tssr18797 2 90904733 to 90904747 14 + TSS region transcription start site region 18797
Kbtbd4 2 90904740 to 90910561 5821 + protein coding gene kelch repeat and BTB (POZ) domain containing 4
Tssr18798 2 90904756 to 90904778 22 + TSS region transcription start site region 18798
Tssr18799 2 90904789 to 90904798 9 + TSS region transcription start site region 18799
Tssr25140 2 90904919 to 90904940 21 - TSS region transcription start site region 25140
Tssr18800 2 90905043 to 90905058 15 + TSS region transcription start site region 18800
Tssr18801 2 90905060 to 90905075 15 + TSS region transcription start site region 18801
Tssr18802 2 90909186 to 90909198 12 + TSS region transcription start site region 18802
Ptpmt1 2 90910713 to 90918050 7337 - protein coding gene protein tyrosine phosphatase, mitochondrial 1