Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:69859267-70219306

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36 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi11719 2 69861227 to 69862145 918 CpG island CpG island 11719
Ssb 2 69861562 to 69871846 10284 + protein coding gene Sjogren syndrome antigen B
Tssr18173 2 69861577 to 69861584 7 + TSS region transcription start site region 18173
Tssr18174 2 69861585 to 69861635 50 + TSS region transcription start site region 18174
Tssr18175 2 69861638 to 69861653 15 + TSS region transcription start site region 18175
Tssr18176 2 69862175 to 69862178 3 + TSS region transcription start site region 18176
Tssr18177 2 69867448 to 69867462 14 + TSS region transcription start site region 18177
Tssr18178 2 69867490 to 69867528 38 + TSS region transcription start site region 18178
Tssr18179 2 69869916 to 69869932 16 + TSS region transcription start site region 18179
Tssr18180 2 69870379 to 69870393 14 + TSS region transcription start site region 18180
Tssr18181 2 69870404 to 69870424 20 + TSS region transcription start site region 18181
Tssr18182 2 69870671 to 69870712 41 + TSS region transcription start site region 18182
Mettl5 2 69871198 to 69885615 14417 - protein coding gene methyltransferase like 5
Gm13625 2 69871412 to 69872202 790 - unclassified non-coding RNA gene predicted gene 13625
Cpgi11720 2 69885233 to 69885989 756 CpG island CpG island 11720
Tssr24451 2 69885557 to 69885630 73 - TSS region transcription start site region 24451
Mettl5os 2 69885728 to 69888155 2427 + antisense lncRNA gene methyltransferase like 5, opposite strand
Cpgi11721 2 69897011 to 69898219 1208 CpG island CpG island 11721
Tssr18183 2 69897194 to 69897206 12 + TSS region transcription start site region 18183
Tssr18184 2 69897220 to 69897247 27 + TSS region transcription start site region 18184
Ubr3 2 69897246 to 70024013 126767 + protein coding gene ubiquitin protein ligase E3 component n-recognin 3
Tssr18185 2 69897255 to 69897294 39 + TSS region transcription start site region 18185
D2Mit349 2 69899905 to 69900035 130 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 349
D2Mit473 2 69899920 to 69900035 115 DNA segment DNA Segment, Chr 2 Massachusetts Institute of Technology 473
Tssr18186 2 69930528 to 69930536 8 + TSS region transcription start site region 18186
Gm13631 2 70038911 to 70042406 3495 + unclassified non-coding RNA gene predicted gene 13631
Tssr18187 2 70039114 to 70039125 11 + TSS region transcription start site region 18187
Myo3b 2 70039126 to 70429195 390069 + protein coding gene myosin IIIB
Tssr18188 2 70039267 to 70039306 39 + TSS region transcription start site region 18188
Tssr18189 2 70070033 to 70070076 43 + TSS region transcription start site region 18189
Tssr24452 2 70089714 to 70089736 22 - TSS region transcription start site region 24452
Tssr18190 2 70091926 to 70091931 5 + TSS region transcription start site region 18190
Tssr18191 2 70094971 to 70094984 13 + TSS region transcription start site region 18191
Tssr516 2 70135351 to 70135374 23 + TSS region transcription start site region 516
Tssr18192 2 70142970 to 70142975 5 + TSS region transcription start site region 18192
Tssr18193 2 70215815 to 70215822 7 + TSS region transcription start site region 18193