Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:69003895-69396194

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76 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cers6 2 68861441 to 69114282 252841 + protein coding gene ceramide synthase 6
Tssr18073 2 69004838 to 69004849 11 + TSS region transcription start site region 18073
Tssr18074 2 69005309 to 69005319 10 + TSS region transcription start site region 18074
Tssr18075 2 69008398 to 69008418 20 + TSS region transcription start site region 18075
Tssr18076 2 69008420 to 69008435 15 + TSS region transcription start site region 18076
Tssr18077 2 69008442 to 69008455 13 + TSS region transcription start site region 18077
Tssr18078 2 69008534 to 69008547 13 + TSS region transcription start site region 18078
Tssr18079 2 69008580 to 69008595 15 + TSS region transcription start site region 18079
Tssr18080 2 69008605 to 69008615 10 + TSS region transcription start site region 18080
Gm37666 2 69013612 to 69014477 865 + unclassified gene predicted gene, 37666
Gm38377 2 69018096 to 69021867 3771 + unclassified gene predicted gene, 38377
Tssr18081 2 69022922 to 69022933 11 + TSS region transcription start site region 18081
Tssr18082 2 69022961 to 69022979 18 + TSS region transcription start site region 18082
Tssr18083 2 69022982 to 69023018 36 + TSS region transcription start site region 18083
Tssr18084 2 69031434 to 69031453 19 + TSS region transcription start site region 18084
Tssr18085 2 69035888 to 69035907 19 + TSS region transcription start site region 18085
Tssr18086 2 69036027 to 69036034 7 + TSS region transcription start site region 18086
Tssr18087 2 69036068 to 69036089 21 + TSS region transcription start site region 18087
Tssr18088 2 69057774 to 69057790 16 + TSS region transcription start site region 18088
Tssr18089 2 69071393 to 69071410 17 + TSS region transcription start site region 18089
Tssr18090 2 69075522 to 69075536 14 + TSS region transcription start site region 18090
Tssr18091 2 69091867 to 69091871 4 + TSS region transcription start site region 18091
Tssr18092 2 69092640 to 69092659 19 + TSS region transcription start site region 18092
Tssr18093 2 69093073 to 69093093 20 + TSS region transcription start site region 18093
Tssr18094 2 69093812 to 69093820 8 + TSS region transcription start site region 18094
Tssr18095 2 69105057 to 69105076 19 + TSS region transcription start site region 18095
Tssr18096 2 69109522 to 69109539 17 + TSS region transcription start site region 18096
Tssr18097 2 69109869 to 69109892 23 + TSS region transcription start site region 18097
Tssr18098 2 69109938 to 69109955 17 + TSS region transcription start site region 18098
Tssr18099 2 69111166 to 69111178 12 + TSS region transcription start site region 18099
Tssr18100 2 69112538 to 69112583 45 + TSS region transcription start site region 18100
Tssr18101 2 69113560 to 69113571 11 + TSS region transcription start site region 18101
Tssr18102 2 69113582 to 69113603 21 + TSS region transcription start site region 18102
Tssr18103 2 69113804 to 69113810 6 + TSS region transcription start site region 18103
Tssr18104 2 69114721 to 69114724 3 + TSS region transcription start site region 18104
Gm39840 2 69121470 to 69130178 8708 - lncRNA gene predicted gene, 39840
Tssr18105 2 69135783 to 69135797 14 + TSS region transcription start site region 18105
Tssr18106 2 69135799 to 69135861 62 + TSS region transcription start site region 18106
Nostrin 2 69135800 to 69189330 53530 + protein coding gene nitric oxide synthase trafficker
Tssr18107 2 69135863 to 69135887 24 + TSS region transcription start site region 18107
Spc25 2 69193895 to 69206194 12299 - protein coding gene SPC25, NDC80 kinetochore complex component, homolog (S. cerevisiae)
Cpgi11708 2 69205652 to 69206368 716 CpG island CpG island 11708
Tssr24421 2 69206133 to 69206144 11 - TSS region transcription start site region 24421
Tssr24422 2 69206146 to 69206191 45 - TSS region transcription start site region 24422
Tssr24423 2 69206198 to 69206207 9 - TSS region transcription start site region 24423
G6pc2 2 69211073 to 69227841 16768 + protein coding gene glucose-6-phosphatase, catalytic, 2
Tssr18108 2 69219989 to 69220005 16 + TSS region transcription start site region 18108
Tssr24424 2 69237451 to 69237464 13 - TSS region transcription start site region 24424
Abcb11 2 69238282 to 69342616 104334 - protein coding gene ATP-binding cassette, sub-family B (MDR/TAP), member 11
Gm13613 2 69248307 to 69272491 24184 + antisense lncRNA gene predicted gene 13613
Gm13614 2 69329739 to 69330241 502 + pseudogene predicted gene 13614
Tssr24425 2 69342558 to 69342570 12 - TSS region transcription start site region 24425
Tssr24426 2 69342578 to 69342592 14 - TSS region transcription start site region 24426
Tssr24427 2 69342604 to 69342624 20 - TSS region transcription start site region 24427
Tssr18109 2 69355614 to 69355628 14 + TSS region transcription start site region 18109
Gm36393 2 69378851 to 69405782 26931 - lncRNA gene predicted gene, 36393
Tssr24428 2 69380306 to 69380317 11 - TSS region transcription start site region 24428
Tssr18110 2 69380431 to 69380458 27 + TSS region transcription start site region 18110
Dhrs9 2 69380462 to 69403086 22624 + protein coding gene dehydrogenase/reductase (SDR family) member 9
Tssr18111 2 69380468 to 69380478 10 + TSS region transcription start site region 18111
Tssr18112 2 69380481 to 69380503 22 + TSS region transcription start site region 18112
Cpgi11709 2 69380506 to 69380681 175 CpG island CpG island 11709
Tssr18113 2 69380533 to 69380542 9 + TSS region transcription start site region 18113
Tssr513 2 69381909 to 69381922 13 - TSS region transcription start site region 513
Tssr18114 2 69382028 to 69382035 7 + TSS region transcription start site region 18114
Tssr18115 2 69382050 to 69382057 7 + TSS region transcription start site region 18115
Tssr18116 2 69382101 to 69382108 7 + TSS region transcription start site region 18116
Tssr24429 2 69382985 to 69383004 19 - TSS region transcription start site region 24429
Tssr24430 2 69383034 to 69383046 12 - TSS region transcription start site region 24430
Mdq4 2 69387396 to 69387396 0 QTL mammary ductal QTL 4
Tssr18117 2 69392986 to 69392995 9 + TSS region transcription start site region 18117
Tssr18118 2 69393056 to 69393090 34 + TSS region transcription start site region 18118
Tssr18119 2 69393102 to 69393175 73 + TSS region transcription start site region 18119
Tssr18120 2 69394152 to 69394193 41 + TSS region transcription start site region 18120
Tssr18121 2 69394209 to 69394257 48 + TSS region transcription start site region 18121
Tssr18122 2 69394486 to 69394502 16 + TSS region transcription start site region 18122