Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:122611285-122931327

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Cpgi12183 2 122610851 to 122611509 658 CpG island CpG island 12183
Cpgi12184 2 122630500 to 122631814 1314 CpG island CpG island 12184
Tssr19851 2 122630599 to 122630676 77 + TSS region transcription start site region 19851
Spata5l1 2 122630625 to 122632930 2305 + protein coding gene spermatogenesis associated 5-like 1
Tssr19852 2 122631195 to 122631226 31 + TSS region transcription start site region 19852
Tssr19853 2 122636962 to 122636973 11 + TSS region transcription start site region 19853
AA467197 2 122636968 to 122641085 4117 + protein coding gene expressed sequence AA467197
Cpgi12185 2 122637574 to 122638029 455 CpG island CpG island 12185
Tssr19854 2 122637844 to 122637864 20 + TSS region transcription start site region 19854
Tssr19855 2 122637867 to 122637923 56 + TSS region transcription start site region 19855
Mir147 2 122640803 to 122640881 78 + miRNA gene microRNA 147
Tssr19856 2 122640867 to 122640890 23 + TSS region transcription start site region 19856
Slc30a4 2 122681233 to 122702663 21430 - protein coding gene solute carrier family 30 (zinc transporter), member 4
Cpgi12186 2 122701860 to 122703019 1159 CpG island CpG island 12186
Tssr25986 2 122702615 to 122702717 102 - TSS region transcription start site region 25986
Tssr25987 2 122702727 to 122702785 58 - TSS region transcription start site region 25987
4930417H01Rik 2 122702828 to 122721456 18628 + lncRNA gene RIKEN cDNA 4930417H01 gene
1700056I18Rik 2 122703539 to 122704106 567 unclassified gene RIKEN cDNA 1700056I18 gene
Tssr25988 2 122704092 to 122704129 37 - TSS region transcription start site region 25988
Tssr19857 2 122704217 to 122704224 7 + TSS region transcription start site region 19857
Tssr19858 2 122704231 to 122704247 16 + TSS region transcription start site region 19858
Tssr19859 2 122704252 to 122704262 10 + TSS region transcription start site region 19859
Bloc1s6os 2 122733290 to 122738362 5072 - antisense lncRNA gene biogenesis of lysosomal organelles complex-1, subunit 6, pallidin, opposite strand
Cpgi12187 2 122738230 to 122738961 731 CpG island CpG island 12187
Tssr25989 2 122738345 to 122738365 20 - TSS region transcription start site region 25989
Tssr19860 2 122738495 to 122738600 105 + TSS region transcription start site region 19860
Bloc1s6 2 122738503 to 122749475 10972 + protein coding gene biogenesis of lysosomal organelles complex-1, subunit 6, pallidin
Tssr19861 2 122738607 to 122738616 9 + TSS region transcription start site region 19861
Tssr19862 2 122738622 to 122738627 5 + TSS region transcription start site region 19862
Tssr19863 2 122738644 to 122738653 9 + TSS region transcription start site region 19863
Tssr19864 2 122746062 to 122746066 4 + TSS region transcription start site region 19864
Cpgi12188 2 122765043 to 122765819 776 CpG island CpG island 12188
Sqor 2 122765237 to 122809569 44332 + protein coding gene sulfide quinone oxidoreductase
Tssr19865 2 122765356 to 122765374 18 + TSS region transcription start site region 19865
Tssr19866 2 122765377 to 122765404 27 + TSS region transcription start site region 19866
Tssr628 2 122771285 to 122771327 42 + TSS region transcription start site region 628
Tssr19867 2 122771689 to 122771702 13 + TSS region transcription start site region 19867
Tssr19868 2 122771710 to 122771719 9 + TSS region transcription start site region 19868
Tssr19869 2 122798172 to 122798192 20 + TSS region transcription start site region 19869
D2Dcr66 2 122826603 to 122826753 150 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 66
D2Mit397 2 122826607 to 122826753 146 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 397
D2Dcr67 2 122826626 to 122826745 119 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 67
D2Mit396 2 122826627 to 122826745 118 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 396
Tssr25990 2 122930187 to 122930195 8 - TSS region transcription start site region 25990
Gm34430 2 122930371 to 122931340 969 + lncRNA gene predicted gene, 34430