Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:120635705-121081689

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56 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Stard9 2 120629091 to 120729033 99942 + protein coding gene START domain containing 9
n-R5s205 2 120640711 to 120640835 124 - rRNA gene nuclear encoded rRNA 5S 205
Gm29693 2 120679930 to 120685035 5105 + pseudogene predicted gene, 29693
Tssr19717 2 120692584 to 120692591 7 + TSS region transcription start site region 19717
Tssr25877 2 120692898 to 120692905 7 - TSS region transcription start site region 25877
Tssr19718 2 120692993 to 120693009 16 + TSS region transcription start site region 19718
D2Dcr32 2 120704127 to 120704458 331 DNA segment DNA segment, Chr 2, Derry C. Roopenian 32
Gm46789 2 120712230 to 120715938 3708 - lncRNA gene predicted gene, 46789
Cdan1 2 120716154 to 120731517 15363 - protein coding gene congenital dyserythropoietic anemia, type I (human)
Cpgi12145 2 120730280 to 120731818 1538 CpG island CpG island 12145
Tssr25878 2 120731198 to 120731211 13 - TSS region transcription start site region 25878
Tssr25879 2 120731342 to 120731349 7 - TSS region transcription start site region 25879
Tssr25880 2 120731503 to 120731534 31 - TSS region transcription start site region 25880
Tssr25881 2 120731741 to 120731748 7 - TSS region transcription start site region 25881
Ttbk2 2 120732816 to 120850584 117768 - protein coding gene tau tubulin kinase 2
D2Dcr35 2 120781622 to 120782054 432 DNA segment DNA segment, Chr 2, Derry C. Roopenian 35
B930063I24Rik 2 120796467 to 120801492 5025 unclassified gene RIKEN cDNA B930063I24 gene
Cpgi12146 2 120849797 to 120850939 1142 CpG island CpG island 12146
Tssr19719 2 120850119 to 120850135 16 + TSS region transcription start site region 19719
Tssr25882 2 120850369 to 120850387 18 - TSS region transcription start site region 25882
Tssr25883 2 120850389 to 120850417 28 - TSS region transcription start site region 25883
Tssr25884 2 120850428 to 120850445 17 - TSS region transcription start site region 25884
Tssr25885 2 120850598 to 120850603 5 - TSS region transcription start site region 25885
Tssr25886 2 120850607 to 120850618 11 - TSS region transcription start site region 25886
Tssr25887 2 120850623 to 120850635 12 - TSS region transcription start site region 25887
Tssr19720 2 120850671 to 120850724 53 + TSS region transcription start site region 19720
AV039307 2 120850705 to 120866689 15984 + lncRNA gene expressed sequence AV039307
Ubr1 2 120860269 to 120970715 110446 - protein coding gene ubiquitin protein ligase E3 component n-recognin 1
Cpgi12147 2 120970299 to 120970966 667 CpG island CpG island 12147
Tssr25888 2 120970597 to 120970636 39 - TSS region transcription start site region 25888
Tssr25889 2 120970646 to 120970703 57 - TSS region transcription start site region 25889
Tssr25890 2 120970706 to 120970761 55 - TSS region transcription start site region 25890
Tssr19721 2 120971648 to 120971652 4 + TSS region transcription start site region 19721
Cpgi12148 2 120976942 to 120977881 939 CpG island CpG island 12148
Tmem62 2 120977017 to 121007852 30835 + protein coding gene transmembrane protein 62
Tssr19722 2 120977081 to 120977107 26 + TSS region transcription start site region 19722
Tssr19723 2 120977148 to 120977185 37 + TSS region transcription start site region 19723
Tssr19724 2 120977248 to 120977308 60 + TSS region transcription start site region 19724
Gm44325 2 120977651 to 120977727 76 - miRNA gene predicted gene, 44325
Rnu3b-ps2 2 121004089 to 121004303 214 + pseudogene U3B small nuclear RNA pseudogene 2
Gm22865 2 121004089 to 121004302 213 + snoRNA gene predicted gene, 22865
Cpgi12149 2 121008275 to 121008751 476 CpG island CpG island 12149
Ccndbp1 2 121008403 to 121016904 8501 + protein coding gene cyclin D-type binding-protein 1
Tssr19725 2 121008416 to 121008481 65 + TSS region transcription start site region 19725
Tssr19726 2 121008488 to 121008506 18 + TSS region transcription start site region 19726
Tssr19727 2 121015936 to 121015940 4 + TSS region transcription start site region 19727
Tssr19728 2 121016398 to 121016423 25 + TSS region transcription start site region 19728
Epb42 2 121017891 to 121036877 18986 - protein coding gene erythrocyte membrane protein band 4.2
Taste2 2 121017891 to 121036877 18986 QTL taste-saccharin preference 2
Tssr25891 2 121025742 to 121025744 2 - TSS region transcription start site region 25891
Tssr25892 2 121036674 to 121036689 15 - TSS region transcription start site region 25892
Tssr25893 2 121036695 to 121036735 40 - TSS region transcription start site region 25893
Tssr25894 2 121036750 to 121036774 24 - TSS region transcription start site region 25894
Tssr25895 2 121037048 to 121037067 19 - TSS region transcription start site region 25895
Tgm5 2 121046111 to 121085759 39648 - protein coding gene transglutaminase 5
Gm14213 2 121049799 to 121050566 767 + pseudogene predicted gene 14213