Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:119241222-119461233

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45 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spint1 2 119237362 to 119249527 12165 + protein coding gene serine protease inhibitor, Kunitz type 1
Tssr19621 2 119267134 to 119267173 39 + TSS region transcription start site region 19621
Rhov 2 119269201 to 119271272 2071 - protein coding gene ras homolog family member V
Cpgi12110 2 119270597 to 119271340 743 CpG island CpG island 12110
Tssr25809 2 119271202 to 119271235 33 - TSS region transcription start site region 25809
Cpgi12111 2 119277890 to 119278112 222 CpG island CpG island 12111
Tssr25810 2 119277983 to 119277992 9 - TSS region transcription start site region 25810
Tssr25811 2 119278004 to 119278015 11 - TSS region transcription start site region 25811
Gm14175 2 119284792 to 119285032 240 + pseudogene predicted gene 14175
Cpgi12112 2 119288410 to 119289119 709 CpG island CpG island 12112
Tssr19622 2 119288725 to 119288771 46 + TSS region transcription start site region 19622
Vps18 2 119288742 to 119298453 9711 + protein coding gene VPS18 CORVET/HOPS core subunit
Tssr19623 2 119288773 to 119288796 23 + TSS region transcription start site region 19623
Tssr19624 2 119288799 to 119288824 25 + TSS region transcription start site region 19624
Cpgi12113 2 119293531 to 119294644 1113 CpG island CpG island 12113
Gm14207 2 119321199 to 119326197 4998 - lncRNA gene predicted gene 14207
Cpgi12114 2 119321851 to 119323168 1317 CpG island CpG island 12114
Cpgi12115 2 119323962 to 119324769 807 CpG island CpG island 12115
Tssr25812 2 119324956 to 119324980 24 - TSS region transcription start site region 25812
Cpgi12116 2 119325116 to 119327493 2377 CpG island CpG island 12116
Tssr25813 2 119325565 to 119325588 23 - TSS region transcription start site region 25813
Tssr25814 2 119325591 to 119325628 37 - TSS region transcription start site region 25814
Dll4 2 119325784 to 119335666 9882 + protein coding gene delta like canonical Notch ligand 4
Tssr19625 2 119325813 to 119325817 4 + TSS region transcription start site region 19625
D2Mit104 2 119328862 to 119329009 147 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 104
D2Dcr63 2 119328891 to 119329010 119 DNA segment DNA Segment, Chr 2, Derry C. Roopenian 63
Tssr19626 2 119329749 to 119329766 17 + TSS region transcription start site region 19626
Cpgi12117 2 119332228 to 119332481 253 CpG island CpG island 12117
Cpgi12118 2 119337531 to 119338550 1019 CpG island CpG island 12118
Tssr25815 2 119346751 to 119346756 5 - TSS region transcription start site region 25815
Cpgi12119 2 119350738 to 119351695 957 CpG island CpG island 12119
Tssr19627 2 119351207 to 119351216 9 + TSS region transcription start site region 19627
Tssr19628 2 119351222 to 119351233 11 + TSS region transcription start site region 19628
Chac1 2 119351242 to 119354326 3084 + protein coding gene ChaC, cation transport regulator 1
Tssr19629 2 119351258 to 119351270 12 + TSS region transcription start site region 19629
Tssr19630 2 119351282 to 119351299 17 + TSS region transcription start site region 19630
Tssr19631 2 119351899 to 119351913 14 + TSS region transcription start site region 19631
Tssr19632 2 119353706 to 119353709 3 + TSS region transcription start site region 19632
Tssr19633 2 119356320 to 119356326 6 + TSS region transcription start site region 19633
Tssr19634 2 119356388 to 119356397 9 + TSS region transcription start site region 19634
Ino80 2 119373042 to 119477629 104587 - protein coding gene INO80 complex subunit
Tssr25816 2 119418459 to 119418464 5 - TSS region transcription start site region 25816
Tssr25817 2 119440187 to 119440193 6 - TSS region transcription start site region 25817
Tssr25818 2 119442859 to 119442863 4 - TSS region transcription start site region 25818
Tssr25819 2 119456424 to 119456437 13 - TSS region transcription start site region 25819