Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 2:10483275-11303283

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135 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Sfmbt2 2 10370510 to 10595253 224743 + protein coding gene Scm-like with four mbt domains 2
Mir467a-3 2 10483678 to 10483760 82 + miRNA gene microRNA 467a-3
Mir466c-2 2 10483966 to 10484055 89 + miRNA gene microRNA 466c-2
Mir669a-6 2 10484196 to 10484282 86 + miRNA gene microRNA 669a-6
Gm23108 2 10484490 to 10484613 123 + miRNA gene predicted gene, 23108
Gm25680 2 10485051 to 10485176 125 + miRNA gene predicted gene, 25680
Gm22775 2 10485250 to 10485369 119 + miRNA gene predicted gene, 22775
Mir467a-4 2 10486135 to 10486217 82 + miRNA gene microRNA 467a-4
Mir466b-4 2 10486423 to 10486512 89 + miRNA gene microRNA 466b-4
Mir669a-7 2 10486653 to 10486739 86 + miRNA gene microRNA 669a-7
Gm26060 2 10486946 to 10487068 122 + miRNA gene predicted gene, 26060
Gm26431 2 10487507 to 10487633 126 + miRNA gene predicted gene, 26431
Gm26229 2 10487704 to 10487824 120 + miRNA gene predicted gene, 26229
Mir467a-5 2 10488599 to 10488681 82 + miRNA gene microRNA 467a-5
Mir466b-5 2 10488887 to 10488974 87 + miRNA gene microRNA 466b-5
Mir669p-1 2 10489116 to 10489202 86 + miRNA gene microRNA 669p-1
Gm24167 2 10489410 to 10489533 123 + miRNA gene predicted gene, 24167
Gm24640 2 10489971 to 10490096 125 + miRNA gene predicted gene, 24640
Gm23288 2 10490167 to 10490287 120 + miRNA gene predicted gene, 23288
Mir467a-6 2 10491048 to 10491130 82 + miRNA gene microRNA 467a-6
Gm25285 2 10491336 to 10491425 89 + miRNA gene predicted gene, 25285
Mir669a-8 2 10491566 to 10491652 86 + miRNA gene microRNA 669a-8
Gm24673 2 10491860 to 10491983 123 + miRNA gene predicted gene, 24673
Gm22635 2 10492421 to 10492546 125 + miRNA gene predicted gene, 22635
Gm23569 2 10492620 to 10492739 119 + miRNA gene predicted gene, 23569
Mir467a-7 2 10493510 to 10493592 82 + miRNA gene microRNA 467a-7
Mir466b-6 2 10493798 to 10493887 89 + miRNA gene microRNA 466b-6
Mir669a-9 2 10494028 to 10494114 86 + miRNA gene microRNA 4669a-9
Gm26426 2 10494321 to 10494443 122 + miRNA gene predicted gene, 26426
Gm24488 2 10494882 to 10495008 126 + miRNA gene predicted gene, 24488
Gm25158 2 10495079 to 10495199 120 + miRNA gene predicted gene, 25158
Mir467a-8 2 10495980 to 10496062 82 + miRNA gene microRNA 467a-8
Mir466b-7 2 10496268 to 10496355 87 + miRNA gene microRNA 466b-7
Mir669p-2 2 10496497 to 10496583 86 + miRNA gene microRNA 669p-2
Gm24028 2 10496791 to 10496914 123 + miRNA gene predicted gene, 24028
Gm22626 2 10497352 to 10497477 125 + miRNA gene predicted gene, 22626
Gm22166 2 10497548 to 10497668 120 + miRNA gene predicted gene, 22166
Mir467a-9 2 10498393 to 10498475 82 + miRNA gene microRNA 467a-9
Mir466b-2 2 10498685 to 10498766 81 + miRNA gene microRNA 466b-2
Mir669a-10 2 10498911 to 10498997 86 + miRNA gene microRNA 669a-10
Gm26156 2 10499204 to 10499326 122 + miRNA gene predicted gene, 26156
Gm23571 2 10499763 to 10499889 126 + miRNA gene predicted gene, 23571
Gm25316 2 10499966 to 10500083 117 + miRNA gene predicted gene, 25316
Gm25022 2 10500822 to 10500904 82 + miRNA gene predicted gene, 25022
Gm25943 2 10501109 to 10501198 89 + miRNA gene predicted gene, 25943
Mir669a-11 2 10501339 to 10501425 86 + miRNA gene microRNA 669a-11
Gm23988 2 10501633 to 10501754 121 + miRNA gene predicted gene, 23988
Gm25673 2 10502191 to 10502317 126 + miRNA gene predicted gene, 25673
Gm25753 2 10502391 to 10502511 120 + miRNA gene predicted gene, 25753
Mir467a-10 2 10503273 to 10503355 82 + miRNA gene microRNA 467a-10
Mir466b-3 2 10503565 to 10503645 80 + miRNA gene microRNA 466b-3
Mir669a-12 2 10503791 to 10503877 86 + miRNA gene microRNA 669a-12
Gm26398 2 10504647 to 10504773 126 + miRNA gene predicted gene, 26398
Mir467e 2 10505721 to 10505807 86 + miRNA gene microRNA 467e
Mir466p 2 10506006 to 10506094 88 + miRNA gene microRNA 466p
Gm22051 2 10506555 to 10506681 126 + miRNA gene predicted gene, 22051
Gm22678 2 10506755 to 10506855 100 + miRNA gene predicted gene, 22678
Mir467d 2 10507630 to 10507714 84 + miRNA gene microRNA 467d
Mir466 2 10507918 to 10507990 72 + miRNA gene microRNA 466
Gm22091 2 10508453 to 10508579 126 + miRNA gene predicted gene, 22091
Mir297c 2 10509016 to 10509113 97 + miRNA gene microRNA 297c
Mir669c 2 10509296 to 10509404 108 + miRNA gene microRNA 669c
Gm24342 2 10509584 to 10509687 103 + miRNA gene predicted gene, 24342
Gm25263 2 10509885 to 10509984 99 + miRNA gene predicted gene, 25263
Mir669a-2 2 10510164 to 10510260 96 + miRNA gene microRNA 669a-2
Gm22239 2 10510461 to 10510563 102 + miRNA gene predicted gene, 22239
Gm22925 2 10510791 to 10510892 101 + miRNA gene predicted gene, 22925
Gm23542 2 10511370 to 10511465 95 + miRNA gene predicted gene, 23542
Mir297b 2 10511667 to 10511775 108 + miRNA gene microRNA 297b
Mir466d 2 10511967 to 10512062 95 + miRNA gene microRNA 466d
Gm26092 2 10512203 to 10512299 96 + miRNA gene predicted gene, 26092
Mir669m-1 2 10512790 to 10512887 97 + miRNA gene microRNA 669m-1
Mir669m-2 2 10513434 to 10513531 97 + miRNA gene microRNA 669m-2
Mir466n 2 10513741 to 10513834 93 + miRNA gene microRNA 466n
Mir669o 2 10514300 to 10514395 95 + miRNA gene microRNA 669o
Mir466g 2 10514595 to 10514674 79 + miRNA gene microRNA 466g
Mir466h 2 10514891 to 10514971 80 + miRNA gene microRNA 466h
Mir297a-3 2 10515820 to 10515921 101 + miRNA gene microRNA 297a-3
Mir466l 2 10516097 to 10516217 120 + miRNA gene microRNA 466l
Mir297a-4 2 10517067 to 10517164 97 + miRNA gene microRNA 297a-4
Gm24806 2 10517337 to 10517426 89 + miRNA gene predicted gene, 24806
Mir669i 2 10517604 to 10517730 126 + miRNA gene microRNA 669i
Mir669h 2 10518155 to 10518279 124 + miRNA gene microRNA 669h
Tssr16093 2 10523311 to 10523321 10 + TSS region transcription start site region 16093
Tssr16094 2 10593177 to 10593191 14 + TSS region transcription start site region 16094
Tssr16095 2 10594861 to 10594869 8 + TSS region transcription start site region 16095
Gm10852 2 10715025 to 10717670 2645 protein coding gene predicted gene 10852
Tssr16096 2 10803064 to 10803083 19 + TSS region transcription start site region 16096
Gm31729 2 10825745 to 10828322 2577 + lncRNA gene predicted gene, 31729
Tssr16097 2 10893275 to 10893283 8 + TSS region transcription start site region 16097
Gm18547 2 10893711 to 10894520 809 + pseudogene predicted gene, 18547
Gm13265 2 10898671 to 10899091 420 - pseudogene predicted gene 13265
Gm13263 2 10959127 to 10959964 837 - pseudogene predicted gene 13263
D2Mit201 2 11001232 to 11001378 146 DNA segment DNA segment, Chr 2, Massachusetts Institute of Technology 201
Gm37343 2 11013808 to 11013918 110 - unclassified gene predicted gene, 37343
Gm23877 2 11014762 to 11014890 128 - snoRNA gene predicted gene, 23877
Gm13264 2 11036874 to 11060129 23255 + lincRNA gene predicted gene 13264
Gm26478 2 11087781 to 11087913 132 - snRNA gene predicted gene, 26478
Gm13297 2 11090844 to 11091763 919 + pseudogene predicted gene 13297
Gm13294 2 11098933 to 11100262 1329 - pseudogene predicted gene 13294
Cpgi11197 2 11099216 to 11099494 278 CpG island CpG island 11197
Tssr22602 2 11159773 to 11159779 6 - TSS region transcription start site region 22602
Tssr22603 2 11160791 to 11160807 16 - TSS region transcription start site region 22603
Tssr22604 2 11170067 to 11170087 20 - TSS region transcription start site region 22604
Tssr16098 2 11171881 to 11171915 34 + TSS region transcription start site region 16098
Cpgi11198 2 11172012 to 11172667 655 CpG island CpG island 11198
Tssr16099 2 11172033 to 11172053 20 + TSS region transcription start site region 16099
Tssr16100 2 11172054 to 11172072 18 + TSS region transcription start site region 16100
Tssr16101 2 11172080 to 11172140 60 + TSS region transcription start site region 16101
Prkcq 2 11172108 to 11301222 129114 + protein coding gene protein kinase C, theta
Tssr402 2 11172140 to 11172145 5 + TSS region transcription start site region 402
Tssr16102 2 11172161 to 11172172 11 + TSS region transcription start site region 16102
Tssr16103 2 11172182 to 11172199 17 + TSS region transcription start site region 16103
Tssr16104 2 11172216 to 11172237 21 + TSS region transcription start site region 16104
Tssr16105 2 11172288 to 11172302 14 + TSS region transcription start site region 16105
Tssr16106 2 11172309 to 11172327 18 + TSS region transcription start site region 16106
Tssr16107 2 11172329 to 11172350 21 + TSS region transcription start site region 16107
Tssr16108 2 11172356 to 11172367 11 + TSS region transcription start site region 16108
Tssr403 2 11172382 to 11172385 3 + TSS region transcription start site region 403
Tssr16109 2 11172388 to 11172419 31 + TSS region transcription start site region 16109
Tssr16110 2 11175863 to 11175873 10 + TSS region transcription start site region 16110
Gm36932 2 11181012 to 11181940 928 + unclassified gene predicted gene, 36932
Gm37520 2 11190641 to 11193312 2671 - unclassified gene predicted gene, 37520
Tssr16111 2 11206025 to 11206035 10 + TSS region transcription start site region 16111
Tssr16112 2 11206109 to 11206112 3 + TSS region transcription start site region 16112
Tssr22605 2 11212008 to 11212025 17 - TSS region transcription start site region 22605
Tssr16113 2 11218449 to 11218462 13 + TSS region transcription start site region 16113
Tssr16114 2 11218493 to 11218504 11 + TSS region transcription start site region 16114
Gm37766 2 11227297 to 11229863 2566 + unclassified gene predicted gene, 37766
Tssr16115 2 11250442 to 11250449 7 + TSS region transcription start site region 16115
Tssr16116 2 11250462 to 11250474 12 + TSS region transcription start site region 16116
Tssr16117 2 11250475 to 11250485 10 + TSS region transcription start site region 16117
Tssr16118 2 11250487 to 11250498 11 + TSS region transcription start site region 16118
Tssr22606 2 11259515 to 11259521 6 - TSS region transcription start site region 22606
Cpgi11199 2 11290137 to 11290698 561 CpG island CpG island 11199