Genes and genomic regions

Find data in MPD that are associated with a particular mouse gene or chromosomal region.


Gene / region search:

  Search gene symbols     Search gene descriptions

Search on a gene symbol or gene name keyword(s).
Or, retrieve using chromosome coordinate ranges in Mbp or bp e.g.   17:44-45   ..or..   X:22500000-23000000

Click here to work with the entire chromosomal region 19:7382673-7472700

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32 genes found.
Gene symbol Chromo-
some		 Coordinates (bp, mm10) Size (bp) Strand Feature Type Gene name
Spindoc 19 7356464 to 7383026 26562 - protein coding gene spindlin interactor and repressor of chromatin binding
Cpgi10554 19 7382173 to 7383342 1169 CpG island CpG island 10554
Tssr157970 19 7382944 to 7382976 32 - TSS region transcription start site region 157970
Tssr157971 19 7382985 to 7383000 15 - TSS region transcription start site region 157971
1700105P06Rik 19 7383003 to 7383561 558 + antisense lncRNA gene RIKEN cDNA 1700105P06 gene
Tssr157972 19 7383020 to 7383025 5 - TSS region transcription start site region 157972
Tssr157973 19 7383029 to 7383063 34 - TSS region transcription start site region 157973
Tssr154750 19 7383123 to 7383135 12 + TSS region transcription start site region 154750
Tssr154751 19 7383143 to 7383160 17 + TSS region transcription start site region 154751
Rab11b-ps2 19 7398421 to 7399077 656 - pseudogene RAB11B, member RAS oncogene family, pseudogene 2
Cpgi10555 19 7398829 to 7399055 226 CpG island CpG island 10555
Gm18842 19 7402834 to 7403431 597 - pseudogene predicted gene, 18842
Cpgi10556 19 7416584 to 7418602 2018 CpG island CpG island 10556
Tssr154752 19 7417127 to 7417229 102 + TSS region transcription start site region 154752
Tssr154753 19 7417586 to 7417650 64 + TSS region transcription start site region 154753
2700081O15Rik 19 7417625 to 7425904 8279 + protein coding gene RIKEN cDNA 2700081O15 gene
Tssr157974 19 7418306 to 7418309 3 - TSS region transcription start site region 157974
Cpgi10557 19 7421310 to 7421474 164 CpG island CpG island 10557
Cpgi10558 19 7421952 to 7423890 1938 CpG island CpG island 10558
Mir6991 19 7422573 to 7422642 69 + miRNA gene microRNA 6991
Rtn3 19 7425901 to 7483289 57388 - protein coding gene reticulon 3
Tssr157975 19 7426519 to 7426559 40 - TSS region transcription start site region 157975
Tssr157976 19 7426822 to 7426835 13 - TSS region transcription start site region 157976
Tssr157977 19 7427141 to 7427156 15 - TSS region transcription start site region 157977
Tssr157978 19 7427673 to 7427700 27 - TSS region transcription start site region 157978
Tssr157979 19 7431018 to 7431037 19 - TSS region transcription start site region 157979
Tssr157980 19 7432008 to 7432052 44 - TSS region transcription start site region 157980
Tssr157981 19 7432494 to 7432512 18 - TSS region transcription start site region 157981
Tssr157982 19 7439658 to 7439668 10 - TSS region transcription start site region 157982
Tssr157983 19 7441560 to 7441579 19 - TSS region transcription start site region 157983
Tssr157984 19 7441580 to 7441616 36 - TSS region transcription start site region 157984
Tssr157985 19 7469605 to 7469607 2 - TSS region transcription start site region 157985